RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ZNF639Q9UID6 485 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 TIMM8BQ9Y5J9 83 aaPredicted RBP19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 EDNRBP24530 442 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 NR1H2P55055 460 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 NFE2L1Q14494 772 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 TAS1R1Q7RTX1 841 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 OR8S1Q8NH09 359 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 POLR2J2Q9GZM3 115 aaKnown RBP19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 NLGN3Q9NZ94 848 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 A0A1W2PPK0 400 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 DYTNA2CJ06 578 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 ARF3P61204 181 aaPredicted RBP19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 ARF1P84077 181 aaKnown RBP19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 NKAPLQ5M9Q1 402 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 PRR22Q8IZ63 422 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 TMEM185BQ9H7F4 350 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 HCSTQ9UBK5 93 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 PIRO00625 290 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 STC2O76061 302 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 OXTRP30559 389 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 RNF111Q6ZNA4 994 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 LRRC69Q6ZNQ3 347 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 CSNK1A1LQ8N752 337 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 HEBP1Q9NRV9 189 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 AGPSO00116 658 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 OPN1LWP04000 364 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 PEX2P28328 305 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 BNIP3Q12983 259 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 OCLNQ16625 522 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 GALNT12Q8IXK2 581 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 PDPRQ8NCN5 879 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 TAS2R9Q9NYW1 312 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 MAP2K7O14733 419 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 H1F0P07305 194 aaKnown RBP19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 UQCRC1P31930 480 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 PLP2Q04941 152 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 RBM39Q14498 530 aaKnown RBP19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 CILP2Q8IUL8 1156 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 KLHL36Q8N4N3 616 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 GLYATL1Q969I3 302 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 NLE1Q9NVX2 485 aaPredicted RBP19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 STOX2Q9P2F5 926 aaPredicted RBP19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 DUOX1Q9NRD9 1551 aa19.58■□□□□ 0.73
CDC42BPB-201ENST00000361246 L7N2F9 121 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 MECP2P51608 486 aaKnown RBP19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 VAMP2P63027 116 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 CNTD1Q8N815 330 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 CHST14Q8NCH0 376 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 DIO2Q92813 273 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 LRRC58Q96CX6 371 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 PRAMEF33A0A0G2JMD5 474 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 TLR4O00206 839 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 PRAMEF10O60809 474 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 IFI30P13284 250 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 POU6F2P78424 691 aaPredicted RBP19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 NSDHLQ15738 373 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 C4orf46Q504U0 113 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 DNM1P34Q6PK57 102 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 SERINC5Q86VE9 423 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 HEMK1Q9Y5R4 338 aaPredicted RBP19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 MYH3P11055 1940 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 APOL3O95236 402 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 MYOGP15173 224 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 C18orf21Q32NC0 220 aaPredicted RBP19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 OR6N2Q8NGY6 317 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 RARRES3Q9UL19 164 aa19.58■□□□□ 0.72
CDC42BPB-201ENST00000361246 SIGLEC1Q9BZZ2 1709 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 TACSTD2P09758 323 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 PRSS56P0CW18 603 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 PFKLP17858 780 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZC3H14Q6PJT7 736 aaKnown RBP19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 PLCZ1Q86YW0 608 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 KRTCAP2Q8N6L1 136 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 OR9I1Q8NGQ6 314 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 OR52B2Q96RD2 323 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 CDKN3Q16667 212 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 GLS2Q9UI32 602 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 WDR45Q9Y484 360 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZNF840PA6NDX5 716 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 S100A10P60903 97 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 RPS26P62854 115 aaKnown RBP19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 ARG2P78540 354 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 CDK6Q00534 326 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 TMEM40Q8WWA1 233 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 ZNF670-ZNF695F2Z2N8 137 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 TSPAN9O75954 239 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 PDYNP01213 254 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 ACRV1P26436 265 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 NIPA2Q8N8Q9 360 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 FANK1Q8TC84 345 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 C7orf26Q96N11 449 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 A0A1W2PRQ8 180 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 RTCAO00442 366 aaKnown RBP19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 CLLU1OSQ5K130 101 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 F2RL3Q96RI0 385 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 DPH7Q9BTV6 452 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 C8orf33Q9H7E9 229 aaPredicted RBP19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 PCDHGB7Q9Y5F8 929 aa19.57■□□□□ 0.72
CDC42BPB-201ENST00000361246 DHFRP00374 187 aa19.56■□□□□ 0.72
CDC42BPB-201ENST00000361246 PEPDP12955 493 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms