RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TMED2Q15363 201 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 ADPRMQ3LIE5 342 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 DET1Q7L5Y6 550 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 DTX2Q86UW9 622 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 TMEM156Q8N614 296 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 TNIP2Q8NFZ5 429 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 ELMO1Q92556 727 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 TBC1D20Q96BZ9 403 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 DPH7Q9BTV6 452 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 LRRC40Q9H9A6 602 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 TREX1Q9NSU2 369 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 COMMD10Q9Y6G5 202 aa5.51□□□□□ -1.53
CDC42SE2-201ENST00000360515 APOA4P06727 396 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 PPARGP37231 505 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 MAN2A2P49641 1150 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 SNRPNP63162 240 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 PSPHP78330 225 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 HYAL2Q12891 473 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 SF1Q15637 639 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 PDCD2Q16342 344 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 PARP6Q2NL67 630 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 ANKRD20A4Q4UJ75 823 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 ANKRD20A2Q5SQ80 823 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 ANKRD20A1Q5TYW2 823 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 ANKRD20A3Q5VUR7 823 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 SYDE1Q6ZW31 735 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 EXOC3L1Q86VI1 746 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 MMABQ96EY8 250 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 WDYHV1Q96HA8 205 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 USB1Q9BQ65 265 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 C19orf24Q9BVV8 132 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 MRPS30Q9NP92 439 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 TRGV5A0A0B4J1U4 118 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 TRBC2A0A5B9 178 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 TMEM89A2RUT3 159 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 OR6C76A6NM76 312 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 NDC80O14777 642 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 HS6ST1O60243 411 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 DNAJB6O75190 326 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 AGTP01019 485 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 H2AFZP0C0S5 128 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 PNLIPRP1P54315 467 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 CBLBQ13191 982 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 SPRED3Q2MJR0 410 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 FOXD4L6Q3SYB3 417 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 FOXD4L3Q6VB84 417 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 H2AFVQ71UI9 128 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 GALNT7Q86SF2 657 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 P3H2Q8IVL5 708 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 CYP4Z2PQ8N1L4 340 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 DTWD1Q8N5C7 304 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 GBP7Q8N8V2 638 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 OR5M3Q8NGP4 307 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 BIRC8Q96P09 236 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 TM9SF2Q99805 663 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 LRRC1Q9BTT6 524 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 OR2B2Q9GZK3 357 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 BARX1Q9HBU1 254 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 ADAP2Q9NPF8 381 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 EIF2B3Q9NR50 452 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 MYOTQ9UBF9 498 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 VWC2LB2RUY7 222 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 E7ENX8 843 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 IGKV3-11P04433 115 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 CDKN1CP49918 316 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 CDK9P50750 372 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 OR4D2P58180 307 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 PRKG2Q13237 762 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 NTRK2Q16620 822 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 UBAP2Q5T6F2 1119 aaKnown RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 SHISA6Q6ZSJ9 500 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 LINC00523Q86TU6 105 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 BLOC1S5Q8TDH9 187 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 ANKRD7Q92527 254 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 PROX1Q92786 737 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 RERGQ96A58 199 aaPredicted RBP5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 TTC1Q99614 292 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 TSC22D4Q9Y3Q8 395 aa5.5□□□□□ -1.53
CDC42SE2-201ENST00000360515 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 FAM227AF5H4B4 570 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 HAT1O14929 419 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 TNFSF13O75888 250 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 ERVK-10P10266 1014 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 NID1P14543 1247 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 PCSK6P29122 969 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 XCR1P46094 333 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 NR1H2P55055 460 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 ELAVL1Q15717 326 aaKnown RBP5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 PCSK7Q16549 785 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 RNF187Q5TA31 235 aaPredicted RBP5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 CYHR1Q6ZMK1 362 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 ABHD13Q7L211 337 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 SLC26A11Q86WA9 606 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 RHOT2Q8IXI1 618 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 RCOR2Q8IZ40 523 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 LRRC17Q8N6Y2 441 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 OR14A16Q8NHC5 309 aa5.49□□□□□ -1.53
CDC42SE2-201ENST00000360515 LKAAEAR1Q8TD35 194 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms