RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 MAOAP21397 527 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NUDT6P53370 316 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 RFTN1Q14699 578 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 LCLAT1Q6UWP7 414 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PLD5Q8N7P1 536 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PCDHAC1Q9H158 963 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 HMX1Q9NP08 348 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 LRCH4O75427 683 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF182P17025 639 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 LRRC55Q6ZSA7 311 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ANKRD13BQ86YJ7 626 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 NAXEQ8NCW5 288 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PNO1Q9NRX1 252 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 FAM120CQ9NX05 1096 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CYP8B1Q9UNU6 501 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 TLX2O43763 284 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 EPHX2P34913 555 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 IL10RBQ08334 325 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 TUSC3Q13454 348 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 EXOC3L2Q2M3D2 409 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 KCNIP4Q6PIL6 250 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SLC22A8Q8TCC7 542 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CPXM1Q96SM3 734 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 H0YAE9 185 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CDC7O00311 574 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PDHXO00330 501 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SLC7A4O43246 635 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CARM1Q86X55 608 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 OR14C36Q8NHC7 312 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 LRRC46Q96FV0 321 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CNTNAP3BQ96NU0 1288 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 IL33O95760 270 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CLCN2P51788 898 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 DUOXA1Q1HG43 343 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 C10orf62Q5T681 223 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 KIAA0930Q6ICG6 404 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 OTOP3Q7RTS5 596 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ALPK1Q96QP1 1244 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 URM1Q9BTM9 101 aaKnown RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 DPEP2Q9H4A9 486 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ADAP2Q9NPF8 381 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CPA4Q9UI42 421 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 DHDHQ9UQ10 334 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MGAT4BQ9UQ53 548 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 MAFO75444 373 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 PIM1P11309 404 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 SLC51AQ86UW1 340 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 CAMKVQ8NCB2 501 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 HOXB13Q92826 284 aaPredicted RBP9.01□□□□□ -0.97
VPS13A-203ENST00000360280 LMTK2Q8IWU2 1503 aa9.01□□□□□ -0.97
VPS13A-203ENST00000360280 ENGP17813 658 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CHATP28329 748 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ACTR1AP61163 376 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 WDR53Q7Z5U6 358 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 GTPBP8Q8N3Z3 284 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 OR13C3Q8NGS6 347 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CMTM7Q96FZ5 175 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ACSS2Q9NR19 701 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ARID1BQ8NFD5 2236 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF850A8MQ14 1090 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 SAP18O00422 153 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 VSX2P58304 361 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 RRAS2P62070 204 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 LASP1Q14847 261 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM205Q6UW68 189 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 GPR149Q86SP6 731 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 EBF2Q9HAK2 575 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 CDK1P06493 297 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 RPL35P42766 123 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 RPP30P78346 268 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 ECH1Q13011 328 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 XYLT1Q86Y38 959 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 HSH2DQ96JZ2 352 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 PTGES2Q9H7Z7 377 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 OR2S2Q9NQN1 319 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ACSL5Q9ULC5 683 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 USP20Q9Y2K6 914 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ARGFXA6NJG6 315 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 IRF6O14896 467 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ENTPD1P49961 510 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF169Q14929 603 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 SH3RF1Q7Z6J0 888 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 LDB1Q86U70 411 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 A0A1B0GVT2 93 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 FRG2Q64ET8 278 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 NIPAL3Q6P499 406 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 FRG2BQ96QU4 278 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 DIP2BQ9P265 1576 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 A8MV72 311 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 MT-CYBP00156 380 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 NDUFV1P49821 464 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 FAM43BQ6ZT52 329 aaPredicted RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 CCDC71LQ8N9Z2 235 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 SDCBP2Q9H190 292 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 PLPPR4Q7Z2D5 763 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 C3orf58Q8NDZ4 430 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 OR2T33Q8NG76 320 aa9□□□□□ -0.97
VPS13A-203ENST00000360280 RRNAD1Q96FB5 475 aaKnown RBP9□□□□□ -0.97
VPS13A-203ENST00000360280 C19orf25Q9UFG5 118 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms