RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 RPP30P78346 268 aaKnown RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 MAB21L1Q13394 359 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ARSIQ5FYB1 569 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 RAB12Q6IQ22 244 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 UNC5DQ6UXZ4 953 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ZNF100Q8IYN0 542 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 KLHDC7BQ96G42 594 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 LENG8Q96PV6 779 aaPredicted RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 TMEM168Q9H0V1 697 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 A0A1W2PPM1 405 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ZNF35P13682 527 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 RAB28P51157 221 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PTGR1Q14914 329 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 KIAA0895LQ68EN5 471 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 GOLGA7Q7Z5G4 137 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 THOC6Q86W42 341 aaKnown RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 GNPDA2Q8TDQ7 276 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 HDHD5Q9BXW7 423 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ITPAQ9BY32 194 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 MROQ9BYG7 248 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 POU2F3Q9UKI9 436 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PMF1-BGLAPU3KQ54 211 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 IFNA5P01569 189 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 LCN1P31025 176 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 DAOAP59103 153 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 ACTA2P62736 377 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 ACTG2P63267 376 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 UTS2BQ765I0 119 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 RDH12Q96NR8 316 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 RIMBP3CA6NJZ7 1639 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 RIMBP3BA6NNM3 1639 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 RIMBP3Q9UFD9 1639 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 TSPAN4O14817 238 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 OXSR1O95747 527 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 ZNF8P17098 575 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 FMO3P31513 532 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SLC18A1P54219 525 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 ZNF763Q0D2J5 394 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 MELKQ14680 651 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 OGFOD2Q6N063 350 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 CLEC20AQ6ZU45 233 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 CERS5Q8N5B7 392 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 BPIFB1Q8TDL5 484 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 CHPT1Q8WUD6 406 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 ZNF641Q96N77 438 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 C3P01024 1663 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 PIGRP01833 764 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 IRF2P14316 349 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 FSTL1Q12841 308 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 CYBRD1Q53TN4 286 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 LIPJQ5W064 366 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 PKP4Q99569 1192 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 FBP2O00757 339 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 ZNF16P17020 682 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 GBX1Q14549 363 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 C6orf120Q7Z4R8 191 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 PROKR1Q8TCW9 393 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 DPEP3Q9H4B8 488 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 NUFIP1Q9UHK0 495 aaKnown RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 KLHL21Q9UJP4 597 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SLC10A6Q3KNW5 377 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 UAP1L1Q3KQV9 507 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 TMEM35AQ53FP2 167 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 PARP8Q8N3A8 854 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 TRIB3Q96RU7 358 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 POPDC3Q9HBV1 291 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 DNAJB5O75953 348 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SLC3A1Q07837 685 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 KCTD19Q17RG1 926 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 ZNF440Q8IYI8 595 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SETD7Q8WTS6 366 aaKnown RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 HSPA12BQ96MM6 686 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 TTYH2Q9BSA4 534 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 TGFB1I1O43294 461 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 IFNGR1P15260 489 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 CFL1P23528 166 aaKnown RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 FUZQ9BT04 418 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 LCHNA4D1U4 455 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 FHP07954 510 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 LMX1AQ8TE12 382 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 BORCS7Q96B45 105 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 OR5B12Q96R08 314 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 RABEPKQ7Z6M1 372 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 LGI4Q8N135 537 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 KATNBL1Q9H079 304 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SFXN1Q9H9B4 322 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 FARSAQ9Y285 508 aaKnown RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 NOP16Q9Y3C1 178 aaKnown RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 MT-ND1P03886 318 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 FPR1P21462 350 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 ZNF829Q3KNS6 432 aaPredicted RBP9.37□□□□□ -0.91
CUX1-203ENST00000360264 MOB2Q70IA6 237 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SPATA22Q8NHS9 363 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SLC7A11Q9UPY5 501 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 NOBOXO60393 691 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 ARSHQ5FYA8 562 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 LRRN4CLQ8ND94 238 aa9.37□□□□□ -0.91
CUX1-203ENST00000360264 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms