RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SLC22A12Q96S37 553 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 CLSTN3Q9BQT9 956 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 CHCHD6Q9BRQ6 235 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 ABCG8Q9H221 673 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 SGK2Q9HBY8 427 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 DYRK4Q9NR20 520 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 PDZK1P1A8MUH7 402 aa17■□□□□ 0.31
RTN4-204ENST00000357732 E7EQ34 232 aa17■□□□□ 0.31
RTN4-204ENST00000357732 ZW10O43264 779 aa17■□□□□ 0.31
RTN4-204ENST00000357732 PCDH7O60245 1069 aa17■□□□□ 0.31
RTN4-204ENST00000357732 C1SP09871 688 aa17■□□□□ 0.31
RTN4-204ENST00000357732 ZNF30P17039 623 aa17■□□□□ 0.31
RTN4-204ENST00000357732 GTF2E2P29084 291 aaKnown RBP17■□□□□ 0.31
RTN4-204ENST00000357732 XCR1P46094 333 aa17■□□□□ 0.31
RTN4-204ENST00000357732 DCDC1P59894 354 aa17■□□□□ 0.31
RTN4-204ENST00000357732 SEMG2Q02383 582 aa17■□□□□ 0.31
RTN4-204ENST00000357732 LMAN2Q12907 356 aa17■□□□□ 0.31
RTN4-204ENST00000357732 SCARB2Q14108 478 aa17■□□□□ 0.31
RTN4-204ENST00000357732 B3GNT7Q8NFL0 401 aa17■□□□□ 0.31
RTN4-204ENST00000357732 UTP15Q8TED0 518 aaKnown RBP17■□□□□ 0.31
RTN4-204ENST00000357732 MAL2Q969L2 176 aa17■□□□□ 0.31
RTN4-204ENST00000357732 MGLLQ99685 303 aa17■□□□□ 0.31
RTN4-204ENST00000357732 NIPSNAP1Q9BPW8 284 aa17■□□□□ 0.31
RTN4-204ENST00000357732 SLC30A2Q9BRI3 323 aa17■□□□□ 0.31
RTN4-204ENST00000357732 OR2B2Q9GZK3 357 aa17■□□□□ 0.31
RTN4-204ENST00000357732 REEP4Q9H6H4 257 aa17■□□□□ 0.31
RTN4-204ENST00000357732 GPBP1L1Q9HC44 474 aaPredicted RBP17■□□□□ 0.31
RTN4-204ENST00000357732 CLN6Q9NWW5 311 aa17■□□□□ 0.31
RTN4-204ENST00000357732 MS4A12Q9NXJ0 267 aa17■□□□□ 0.31
RTN4-204ENST00000357732 HS3ST2Q9Y278 367 aa17■□□□□ 0.31
RTN4-204ENST00000357732 KIAA0513O60268 411 aa17■□□□□ 0.31
RTN4-204ENST00000357732 AQP1P29972 269 aa17■□□□□ 0.31
RTN4-204ENST00000357732 CRATP43155 626 aa17■□□□□ 0.31
RTN4-204ENST00000357732 SLC15A1P46059 708 aa17■□□□□ 0.31
RTN4-204ENST00000357732 GJA8P48165 433 aa17■□□□□ 0.31
RTN4-204ENST00000357732 RHAGQ02094 409 aa17■□□□□ 0.31
RTN4-204ENST00000357732 TMEM150AQ86TG1 271 aa17■□□□□ 0.31
RTN4-204ENST00000357732 TRIM69Q86WT6 500 aa17■□□□□ 0.31
RTN4-204ENST00000357732 RNF130Q86XS8 419 aa17■□□□□ 0.31
RTN4-204ENST00000357732 RNF175Q8N4F7 328 aa17■□□□□ 0.31
RTN4-204ENST00000357732 ELMO1Q92556 727 aa17■□□□□ 0.31
RTN4-204ENST00000357732 TAPBPLQ9BX59 468 aa17■□□□□ 0.31
RTN4-204ENST00000357732 AMBNQ9NP70 447 aa17■□□□□ 0.31
RTN4-204ENST00000357732 TMPRSS11EQ9UL52 423 aa17■□□□□ 0.31
RTN4-204ENST00000357732 ZAR1LA6NP61 321 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 CCNB2O95067 398 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 KRT8P05787 483 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 SRCP12931 536 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 ENDOUP21128 410 aaKnown RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 CBLP22681 906 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 CHMP24386 653 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 NUDT6P53370 316 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 POLR2LP62875 67 aaKnown RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 ZNF763Q0D2J5 394 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 PLAG1Q6DJT9 500 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 KIAA1841Q6NSI8 718 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 AGTRAPQ6RW13 159 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 DNAJB7Q7Z6W7 309 aaPredicted RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 ATCAYQ86WG3 371 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 OR56A3Q8NH54 315 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 CEP19Q96LK0 163 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 BBS2Q9BXC9 721 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 NEK6Q9HC98 313 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 RLIMQ9NVW2 624 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 ZNF451Q9Y4E5 1061 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 CFAP20Q9Y6A4 193 aaKnown RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 FAM172BPA6NC97 362 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 UGT2B17O75795 530 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 CATP04040 527 aaKnown RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 SPNP16150 400 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 RHCEP18577 417 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 ZXDBP98169 803 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 DDX39BQ13838 428 aaKnown RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 MEDAGQ5VYS4 303 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 HTR3DQ70Z44 454 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 CYP4Z2PQ8N1L4 340 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 OR7G3Q8NG95 312 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 MTERF3Q96E29 417 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 Q96MT0 163 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 CCDC177Q9NQR7 707 aaPredicted RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 ACER3Q9NUN7 267 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 GPATCH2Q9NW75 528 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 QPCTLQ9NXS2 382 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 SH3BP4Q9P0V3 963 aa16.99■□□□□ 0.31
RTN4-204ENST00000357732 STOX2Q9P2F5 926 aaPredicted RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 NFKBIL1Q9UBC1 381 aaPredicted RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 WBP11Q9Y2W2 641 aaKnown RBP16.99■□□□□ 0.31
RTN4-204ENST00000357732 COL4A6Q14031 1691 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 GNG14A0A1W2PPG7 69 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 ARHGEF33A8MVX0 844 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 CCNKO75909 580 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 SLITRK5O94991 958 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 POP4O95707 220 aaKnown RBP16.98■□□□□ 0.31
RTN4-204ENST00000357732 COPZ1P61923 177 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 EEF1A2Q05639 463 aaKnown RBP16.98■□□□□ 0.31
RTN4-204ENST00000357732 PDE7AQ13946 482 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 STARD3Q14849 445 aa16.98■□□□□ 0.31
RTN4-204ENST00000357732 PTGES3Q15185 160 aaKnown RBP16.98■□□□□ 0.31
RTN4-204ENST00000357732 RNLSQ5VYX0 342 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms