RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 BACE2Q9Y5Z0 518 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 C9J4A7 227 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 FAAHO00519 579 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 DLGAP1O14490 977 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 S1PR4O95977 384 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 MT-ND5P03915 603 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 OPN1SWP03999 348 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PRKCGP05129 697 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 BTN3A2P78410 334 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 ADAM17P78536 824 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 NIPAL4Q0D2K0 466 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 BNIP3Q12983 259 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 EIF4HQ15056 248 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 RAB30Q15771 203 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 VMACQ2NL98 169 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 CDKL4Q5MAI5 379 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF550Q7Z398 422 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 SLC9B2Q86UD5 537 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PROKR2Q8NFJ6 384 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 OR2L5Q8NG80 312 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PIGKQ92643 395 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 SLC30A2Q9BRI3 323 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 ASPNQ9BXN1 380 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 TLR9Q9NR96 1032 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 ERVK-11Q9UQG0 969 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 CDH10Q9Y6N8 788 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 HNRNPA1P09651 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 SLC35E2BP0CK96 405 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 C1GALT1C1LP0DN25 315 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 HOXD8P13378 290 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 TSTQ16762 297 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PUS10Q3MIT2 529 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 C12orf40Q86WS4 652 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 ZSWIM9Q86XI8 627 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PSD4Q8NDX1 1056 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 OR5AK3PQ8NH89 298 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 IRF7Q92985 503 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 TMEM74Q96NL1 305 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 TSSK6Q9BXA6 273 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PCDHB16Q9NRJ7 776 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 WDR45Q9Y484 360 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PFKLP17858 780 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 MATN1P21941 496 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 GDI1P31150 447 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 MLLT3P42568 568 aaPredicted RBP11.34□□□□□ -0.59
COL9A1-202ENST00000357250 GDF5P43026 501 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 TREML1Q86YW5 311 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 PNPLA2Q96AD5 504 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 PELOQ9BRX2 385 aaKnown RBP11.34□□□□□ -0.59
COL9A1-202ENST00000357250 FBXL12Q9NXK8 326 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 TJP1Q07157 1748 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 NWD2Q9ULI1 1742 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 MTX2O75431 263 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 JUNP05412 331 aaKnown RBP11.34□□□□□ -0.59
COL9A1-202ENST00000357250 GALTP07902 379 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 HK1P19367 917 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 EDNRAP25101 427 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 HOXA11P31270 313 aaPredicted RBP11.34□□□□□ -0.59
COL9A1-202ENST00000357250 TIA1P31483 386 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL9A1-202ENST00000357250 XKRXQ6PP77 449 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 C14orf80Q86SX3 495 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 NRSN1Q8IZ57 195 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 SLC22A15Q8IZD6 547 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 SHDQ96IW2 340 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 CITED4Q96RK1 184 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 PMF1-BGLAPU3KQ54 211 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 A0A0J9YVX5 310 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 ISPDA4D126 451 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 OR5K4A6NMS3 321 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 MAFKO60675 156 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 KCNJ13O60928 360 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF432O94892 652 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 C6orf47O95873 294 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 AK1P00568 194 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 JUPP14923 745 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 FDXRP22570 491 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 GABARAPL2P60520 117 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 GK3PQ14409 553 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 ARL9Q6T311 187 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 C7orf61Q8IZ16 206 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 ATP6V1C2Q8NEY4 427 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 GLYATL1Q969I3 302 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 CREB3L1Q96BA8 519 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 ADAD1Q96M93 576 aaKnown RBP11.34□□□□□ -0.59
COL9A1-202ENST00000357250 DOHHQ9BU89 302 aa11.34□□□□□ -0.59
COL9A1-202ENST00000357250 NDRG2Q9UN36 371 aaKnown RBP11.34□□□□□ -0.59
COL9A1-202ENST00000357250 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 CCRL2O00421 344 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 OXSR1O95747 527 aaPredicted RBP11.33□□□□□ -0.59
COL9A1-202ENST00000357250 HSD17B1P14061 328 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 ACRV1P26436 265 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 CDH15P55291 814 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 MAB21L1Q13394 359 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF234Q14588 700 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 UNC50Q53HI1 259 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 UNC5DQ6UXZ4 953 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 KBTBD6Q86V97 674 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 ANKFN1Q8N957 763 aa11.33□□□□□ -0.59
COL9A1-202ENST00000357250 TMIEQ8NEW7 156 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms