RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 RAET1LQ5VY80 246 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FBXL22Q6P050 247 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SLC36A4Q6YBV0 504 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 METTL27Q8N6F8 245 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GATAD2BQ8WXI9 593 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 KREMEN1Q96MU8 473 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 COL21A1Q96P44 957 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 NODALQ96S42 347 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 COPS4Q9BT78 406 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 KAT8Q9H7Z6 458 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SLC7A8Q9UHI5 535 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MYH11P35749 1972 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SH3D21A4FU49 640 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ABCB7O75027 752 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 POP7O75817 140 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CSN2P05814 226 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MYCLP1P12525 358 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PORP16435 677 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FOLR3P41439 243 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MELKQ14680 651 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CA9Q16790 459 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PITRM1Q5JRX3 1037 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ASPGQ86U10 573 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SPAG16Q8N0X2 631 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 OR5AK3PQ8NH89 298 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 C9orf43Q8TAL5 461 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PLEKHO2Q8TD55 490 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 DAZLQ92904 295 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 OR1F2PQ96R84 312 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF350Q9GZX5 532 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM168Q9H0V1 697 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TAS2R9Q9NYW1 312 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 UBR1Q8IWV7 1749 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 IFNA2P01563 188 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 NCK1P16333 377 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 S1PR1P21453 382 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 LMO2P25791 158 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 RBPJQ06330 500 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 RHEBQ15382 184 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FBXO48Q5FWF7 155 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TFGQ92734 400 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GFM1Q96RP9 751 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CD180Q99467 661 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 HERPUD2Q9BSE4 406 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SNTG1Q9NSN8 517 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FAIMQ9NVQ4 179 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF358Q9NW07 568 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF224Q9NZL3 707 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CA14Q9ULX7 337 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CDH10Q9Y6N8 788 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 A0A1W2PPM1 405 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 FABP12A6NFH5 140 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 CHRNB4P30926 498 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 VSX2P58304 361 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF460Q14592 562 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 PLEKHN1Q494U1 663 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 PPM1JQ5JR12 505 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 LGI4Q8N135 537 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 C1orf52Q8N6N3 182 aaKnown RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 DCAF4L2Q8NA75 395 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 SCAMP5Q8TAC9 235 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 SPRYD4Q8WW59 207 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 C22orf15Q8WYQ4 148 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 MMABQ96EY8 250 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 MAP3K3Q99759 626 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 CIB1Q99828 191 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 LRRC3Q9BY71 257 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 HRASLS2Q9NWW9 162 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 VNN3Q9NY84 501 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 ICKQ9UPZ9 632 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 HCN4Q9Y3Q4 1203 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 TELO2Q9Y4R8 837 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 CFAP20Q9Y6A4 193 aaKnown RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 CLDN25C9JDP6 229 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 KDELR3O43731 214 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 STATHP02808 62 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 ALDOAP04075 364 aaKnown RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 HAPLN1P10915 354 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 NRLP54845 237 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 RPS24P62847 133 aaKnown RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 PLGLAQ15195 96 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 ARL13AQ5H913 290 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 GPR153Q6NV75 609 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 LANCL3Q6ZV70 420 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 PAQR7Q86WK9 346 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 CPT1CQ8TCG5 803 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 THEM6Q8WUY1 208 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM41AQ96HV5 264 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 SLCO1B3Q9NPD5 702 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 TMLHEQ9NVH6 421 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 PPP1R14DQ9NXH3 145 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 NOCTQ9UK39 431 aaKnown RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 MKLN1Q9UL63 735 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 SLIT2O94813 1529 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 FAM149AA5PLN7 773 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 YJEFN3A6XGL0 299 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 JUNP05412 331 aaKnown RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 GSTM2P28161 218 aa5.35□□□□□ -1.55
PTPRD-202ENST00000356435 EEFSECP57772 596 aaKnown RBP5.35□□□□□ -1.55
PTPRD-202ENST00000356435 NPTX1Q15818 432 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms