RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GSRP00390 522 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 HAPLN1P10915 354 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 KCNE1P15382 129 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GJA1P17302 382 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GRIA2P42262 883 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 GJA8P48165 433 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 HSD11B2P80365 405 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZNF763Q0D2J5 394 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 MLC1Q15049 377 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 KHDC1Q4VXA5 237 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 MLIPQ5VWP3 458 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 KIAA1614Q5VZ46 1190 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 REEP3Q6NUK4 255 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 ZNF517Q6ZMY9 492 aaPredicted RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 TIFABQ6ZNK6 161 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NLGN2Q8NFZ4 835 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 OR4F6Q8NGB9 312 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 KIAA1191Q96A73 305 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 CDK15Q96Q40 435 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 POLDIP3Q9BY77 421 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 FGFBP2Q9BYJ0 223 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 FXYD6Q9H0Q3 95 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TAS2R10Q9NYW0 307 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 NUFIP1Q9UHK0 495 aaKnown RBP6.26□□□□□ -1.41
UPF2-201ENST00000356352 MAFFQ9ULX9 164 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 HCN4Q9Y3Q4 1203 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 HS3ST4Q9Y661 456 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 TMEM131LA2VDJ0 1609 aa6.26□□□□□ -1.41
UPF2-201ENST00000356352 A0A0U1RQF3 1178 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 DPPA5A6NC42 116 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 FTCDNL1E5RQL4 147 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 BCAS2O75934 225 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 JUNP05412 331 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 ZNF35P13682 527 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 VAMP1P23763 118 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SUOXP51687 545 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TPTEP56180 551 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 RPS24P62847 133 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 GBX1Q14549 363 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 KCNJ11Q14654 390 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 GNMTQ14749 295 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CHRFAM7AQ494W8 412 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 BORAQ6PGQ7 559 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 AGTRAPQ6RW13 159 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OR4K14Q8NGD5 310 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OR5T2Q8NGG2 359 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 SCAMP5Q8TAC9 235 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 FCAMRQ8WWV6 532 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 HS6ST2Q96MM7 605 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 AP1S3Q96PC3 154 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PKP4Q99569 1192 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TSSK6Q9BXA6 273 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TTYH3Q9C0H2 523 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OR51I1Q9H343 314 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PDE7BQ9NP56 450 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TMEM9Q9P0T7 183 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ATPIF1Q9UII2 106 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 KLHL21Q9UJP4 597 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 C3P01024 1663 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 MROH1Q8NDA8 1641 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PRSS51A0A1B0GVH4 220 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 A0A1W2PP18 115 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 KHNYNO15037 678 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 LSM1O15116 133 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 SCAMP1O15126 338 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CREG1O75629 220 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 HSD3B1P14060 373 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OXTRP30559 389 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 GPR143P51810 404 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PSMA6P60900 246 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 KCNC4Q03721 635 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 MALLQ13021 153 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 AIMP2Q13155 320 aaKnown RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 MS4A13Q5J8X5 152 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ZNF283Q8N7M2 679 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OR4E2Q8NGC2 313 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 OR5P2Q8WZ92 322 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TM9SF4Q92544 642 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TMEM41AQ96HV5 264 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 GPR22Q99680 433 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TPT1P8Q9HAU6 139 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 RAB9BQ9NP90 201 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 CTPS2Q9NRF8 586 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PRTFDC1Q9NRG1 225 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 GHRLQ9UBU3 117 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PPM1HQ9ULR3 514 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 TMEM14AQ9Y6G1 99 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 M0QX08 132 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 FAAHO00519 579 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 GRID2O43424 1007 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 UGT1A9O60656 530 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 PRAMEF11O60813 436 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 DNAJB5O75953 348 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 IFI30P13284 250 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 ATF4P18848 351 aaPredicted RBP6.25□□□□□ -1.41
UPF2-201ENST00000356352 UGT1A6P19224 532 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 UGT1A4P22310 534 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 S100PP25815 95 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 LCN1P31025 176 aa6.25□□□□□ -1.41
UPF2-201ENST00000356352 STC1P52823 247 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms