RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 RPL36Q9Y3U8 105 aaKnown RBP10.89□□□□□ -0.67
FN1-204ENST00000356005 SCN2AQ99250 2005 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 PLXNA1Q9UIW2 1896 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 BLACEA4D250 179 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 RLN1P04808 185 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 RAP2AP10114 183 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 NR1H2P55055 460 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 IL18Q14116 193 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 QPCTQ16769 361 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 SLC36A3Q495N2 470 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 Q6ZVL8 140 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 TOR1AIP2Q8NFQ8 470 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 HBEGFQ99075 208 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 MAP3K3Q99759 626 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 PROM1O43490 865 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 CDC40O60508 579 aaKnown RBP eCLIP10.89□□□□□ -0.67
FN1-204ENST00000356005 VIPR2P41587 438 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 SPINT3P49223 89 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 LAMB2P55268 1798 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 HTRA3P83110 453 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 SEC23BQ15437 767 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 ZNF781Q8N8C0 355 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 TRMT2BQ96GJ1 504 aaKnown RBP10.89□□□□□ -0.67
FN1-204ENST00000356005 FAM84AQ96KN4 292 aa10.89□□□□□ -0.67
FN1-204ENST00000356005 POLR1CO15160 346 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 ITGA5P08648 1049 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 NIPAL4Q0D2K0 466 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 MPP7Q5T2T1 576 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 RAET1LQ5VY80 246 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 SLC39A11Q8N1S5 342 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 NKD1Q969G9 470 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 NXPE2Q96DL1 559 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 ARL5BQ96KC2 179 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 SLC7A11Q9UPY5 501 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 GADD45AP24522 165 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 DSC1Q08554 894 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 UMODL1-AS1Q8N2C9 162 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 SLCO2A1Q92959 643 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 NINJ1Q92982 152 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 CENPNQ96H22 339 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 PIWIL1Q96J94 861 aaKnown RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 HHIPQ96QV1 700 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 CENPMQ9NSP4 180 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 GPRC5BQ9NZH0 403 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 LAMP5Q9UJQ1 280 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 PPM1HQ9ULR3 514 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 PLAGL1Q9UM63 463 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 TESMINQ9Y4I5 508 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 HCRTR2O43614 444 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 THRBP10828 461 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 UQCRC2P22695 453 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 ZNF267Q14586 743 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 FASTKD3Q14CZ7 662 aaKnown RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 ZNF676Q8N7Q3 588 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 MRPL38Q96DV4 380 aaKnown RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 WBP11Q9Y2W2 641 aaKnown RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 FOXD2O60548 495 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 C9P02748 559 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 BDH1Q02338 343 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 HYAL2Q12891 473 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 LRRC25Q8N386 305 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 SLC5A8Q8N695 610 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 C2CD4AQ8NCU7 369 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 C11orf24Q96F05 449 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 PRR11Q96HE9 360 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 MPP4Q96JB8 637 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 PCYT2Q99447 389 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 WDR55Q9H6Y2 383 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 C11orf16Q9NQ32 467 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 SAGE2PA6NJ88 616 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 PLOD3O60568 738 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 STK19P49842 368 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 EEFSECP57772 596 aaKnown RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 ARHGAP8P85298 464 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 MANEAQ5SRI9 462 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 DCAF12Q5T6F0 453 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 SUSD1Q6UWL2 747 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 Q6ZSR6 202 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 FGF13Q92913 245 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 YIPF4Q9BSR8 244 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 SMPD3Q9NY59 655 aaPredicted RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 OR51F1A6NGY5 319 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 ANGPTL1O95841 491 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 CD9P21926 228 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 GPR143P51810 404 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 AFF3P51826 1226 aaKnown RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 GOLGA7Q7Z5G4 137 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 IQCF2Q8IXL9 164 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 KLHL36Q8N4N3 616 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 DNAAF1Q8NEP3 725 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 IMP4Q96G21 291 aaKnown RBP10.88□□□□□ -0.67
FN1-204ENST00000356005 GPR160Q9UJ42 338 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 POFUT2Q9Y2G5 429 aa10.88□□□□□ -0.67
FN1-204ENST00000356005 TMEM265A0A087WTH1 108 aa10.87□□□□□ -0.67
FN1-204ENST00000356005 HOXB9P17482 250 aaPredicted RBP10.87□□□□□ -0.67
FN1-204ENST00000356005 MAPK3P27361 379 aaPredicted RBP10.87□□□□□ -0.67
FN1-204ENST00000356005 PLCXD2Q0VAA5 305 aa10.87□□□□□ -0.67
FN1-204ENST00000356005 OCLNQ16625 522 aa10.87□□□□□ -0.67
FN1-204ENST00000356005 PTCHD3Q3KNS1 767 aa10.87□□□□□ -0.67
FN1-204ENST00000356005 PYHIN1Q6K0P9 492 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms