RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 GINS1Q14691 196 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 GET4Q7L5D6 327 aaPredicted RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 RAB11FIP2Q7L804 512 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 FTMTQ8N4E7 242 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 CASTOR1Q8WTX7 329 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 GON7Q9BXV9 100 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 WDR6Q9NNW5 1121 aaKnown RBP12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 NLKQ9UBE8 527 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 ASB4Q9Y574 426 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 DIP2CQ9Y2E4 1556 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 PLIN4Q96Q06 1357 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 DIO3P55073 304 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 TRAM2Q15035 370 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 TTPALQ9BTX7 342 aa12.31□□□□□ -0.44
SYNCRIP-201ENST00000355238 STBD1O95210 358 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 CDHR3Q6ZTQ4 885 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 CERS5Q8N5B7 392 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 PMM1Q92871 262 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 TCEAL3Q969E4 200 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 CACNG6Q9BXT2 260 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 FCF1Q9Y324 198 aaKnown RBP12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 MROH2AA6NES4 1674 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 ADH1CP00326 375 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 AHCYP23526 432 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 ADH6P28332 368 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 CCR8P51685 355 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 FGFBP1Q14512 234 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC10A6Q3KNW5 377 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 DNM1P34Q6PK57 102 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC22A17Q8WUG5 538 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 PRR11Q96HE9 360 aaPredicted RBP12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 AIG1Q9NVV5 245 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 GSKIPQ9P0R6 139 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 ARHGEF28Q8N1W1 1705 aaKnown RBP12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 WTIPA6NIX2 430 aaPredicted RBP12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 M0R2N6 131 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 SAP18O00422 153 aaKnown RBP12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 RASGRP1O95267 797 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 GTF2F2P13984 249 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 GALNT2Q10471 571 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 SNTA1Q13424 505 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 TMEM69Q5SWH9 247 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 HSDL2Q6YN16 418 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 GDPGP1Q6ZNW5 385 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 BEST3Q8N1M1 668 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 GALNT11Q8NCW6 608 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 GAB3Q8WWW8 586 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF514Q96K75 400 aaPredicted RBP12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 COQ10AQ96MF6 247 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 PIP5K1AQ99755 562 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 TCEAL7Q9BRU2 100 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 FBXL3Q9UKT7 428 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 CHD1O14646 1710 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 LRRC72A6NJI9 287 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 NEDD8-MDP1E9PL57 170 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 FGF19O95750 216 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC6A6P31641 620 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 STC1P52823 247 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 PRMT2P55345 433 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 UBXN11Q5T124 520 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 HMX3A6NHT5 357 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 MEN1O00255 615 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 UBXN7O94888 489 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 TGFB1P01137 390 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 CFHP08603 1231 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 F7P08709 466 aaPredicted RBP12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 T-ENOLP0DO92 83 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 TECRLQ5HYJ1 363 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 SLC27A4Q6P1M0 643 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR7G2Q8NG99 324 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR14K1Q8NGZ2 314 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 RIT1Q92963 219 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 PYCR2Q96C36 320 aa12.3□□□□□ -0.44
SYNCRIP-201ENST00000355238 ENPP3O14638 875 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 LMO2P25791 158 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 DCP2Q8IU60 420 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 OR56A1Q8NGH5 318 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 GIMAP2Q9UG22 337 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 CPQQ9Y646 472 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 LYRM1O43325 122 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 CLUP10909 449 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 DGKEP52429 567 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 ACTC1P68032 377 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 ACTA1P68133 377 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 SSX6Q7RTT6 188 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 TMEM151AQ8N4L1 468 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 PQLC3Q8N755 202 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 KCTD13Q8WZ19 329 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 C7orf34Q96L11 122 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 CD244Q9BZW8 370 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 SYT4Q9H2B2 425 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 UNKLQ9H9P5 680 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 SMAD9O15198 467 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 RGS9O75916 674 aaPredicted RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 VIPP01282 170 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 KLK1P06870 262 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 GABRR2P28476 465 aa12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 RBMXP38159 391 aaKnown RBP12.29□□□□□ -0.44
SYNCRIP-201ENST00000355238 LRRC37A5PQ49AS3 106 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms