RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 ACSL4O60488 711 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 PSIP1O75475 530 aaKnown RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 OTCP00480 354 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 PIRTP0C851 137 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 HOXB1P14653 301 aaPredicted RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 HK1P19367 917 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 SDC2P34741 201 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 ZNF81P51508 661 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 FAM189BP81408 668 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 SLC10A7Q0GE19 358 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 PTGES3Q15185 160 aaKnown RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 SNAPC1Q16533 368 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 C22orf42Q6IC83 251 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 CNIH2Q6PI25 160 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 TFAP2EQ6VUC0 442 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 RTL4Q6ZR62 310 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 CATSPERGQ6ZRH7 1159 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 TSEN54Q7Z6J9 526 aaKnown RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 OR52J3Q8NH60 311 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 UCN3Q969E3 161 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 SIPA1Q96FS4 1042 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 B3GALT6Q96L58 329 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 GSX2Q9BZM3 304 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 POLR2J2Q9GZM3 115 aaKnown RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 CCSER2Q9H7U1 834 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 LRTM1Q9HBL6 345 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 TMEM30AQ9NV96 361 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 SLCO1C1Q9NYB5 712 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 PRAMEF33A0A0G2JMD5 474 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 A0A1W2PPL8 197 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 hCG_1807616A0A1W2PRN6 198 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 J3KR12 359 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 CLIC1O00299 241 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 FGF10O15520 208 aaPredicted RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 TREHO43280 583 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 PRAMEF10O60809 474 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 PTP4A3O75365 173 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 ANXA8P13928 327 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 NUP62P37198 522 aaPredicted RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 CRYBA2P53672 197 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 BACE1P56817 501 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 CDC42P60953 191 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 HSF2Q03933 536 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 PUDPQ08623 228 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 IL18Q14116 193 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 LRRC32Q14392 662 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 PCBP2Q15366 365 aaKnown RBP eCLIP7.56□□□□□ -1.24e-15■□□□□ 11.1
CD46-203ENST00000354848 PTPRNQ16849 979 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 IGSF11Q5DX21 431 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 SGO1Q5FBB7 561 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 MSANTD2Q6P1R3 559 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 LRFN4Q6PJG9 635 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 CHMP1BQ7LBR1 199 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 RASGRP3Q8IV61 690 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 RGL4Q8IZJ4 473 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 RBFAQ8N0V3 343 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 DNAJC5GQ8N7S2 189 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 TTC16Q8NEE8 873 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 OR9Q1Q8NGQ5 310 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 OSMRQ99650 979 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 SMOQ99835 787 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 P2RY13Q9BPV8 354 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 HTATIP2Q9BUP3 242 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 REG4Q9BYZ8 158 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 RERGLQ9H628 205 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 AGO3Q9H9G7 860 aaKnown RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 GOLGA2P5Q9HBQ8 144 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 EMC7Q9NPA0 242 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 LYARQ9NX58 379 aaKnown RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 MPP6Q9NZW5 540 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 COMMD3Q9UBI1 195 aa7.56□□□□□ -1.2
CD46-203ENST00000354848 KLF2Q9Y5W3 355 aaPredicted RBP7.56□□□□□ -1.2
CD46-203ENST00000354848 LOC285095A0A1B0GVY8 99 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 LINC01387J3KSC0 135 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 SLC28A1O00337 649 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 NIPSNAP2O75323 286 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 PIPP12273 146 aaPredicted RBP7.55□□□□□ -1.2
CD46-203ENST00000354848 POU2F1P14859 743 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 ENGP17813 658 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 F8A1P23610 371 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 HOXC13P31276 330 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 RENBPP51606 427 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 IL2P60568 153 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 GPR85P60893 370 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 ERVK-21P61565 698 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 RPS14P62263 151 aaKnown RBP7.55□□□□□ -1.2
CD46-203ENST00000354848 BTG1P62324 171 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 SPDYE7PQ495Y7 208 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 RAB41Q5JT25 222 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 ARTNQ5T4W7 220 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 AFMIDQ63HM1 303 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 BICRALQ6AI39 1079 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 PTCHD4Q6ZW05 846 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 LIMS2Q7Z4I7 341 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 MS4A15Q8N5U1 240 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 SRFBP1Q8NEF9 429 aaKnown RBP7.55□□□□□ -1.2
CD46-203ENST00000354848 OR9Q2Q8NGE9 314 aa7.55□□□□□ -1.2
CD46-203ENST00000354848 TMEM203Q969S6 136 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms