RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 THOC1Q96FV9 657 aaKnown RBP23.03■■□□□ 1.28
HMGA2-201ENST00000354636 APIPQ96GX9 242 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 KCNC2Q96PR1 638 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 C17orf62Q9BQA9 187 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 ZPBPQ9BS86 351 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 ZNF717Q9BY31 904 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-201ENST00000354636 LHX9Q9NQ69 397 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 PRDM7Q9NQW5 492 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 RIC8BQ9NVN3 520 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 SRPK3Q9UPE1 567 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 PCDHGA3Q9Y5H0 932 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 TROVE2P10155 538 aaKnown RBP eCLIP23.03■■□□□ 1.286e-8■□□□□ 8.5
HMGA2-201ENST00000354636 RAP1GDS1P52306 607 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 AQP5P55064 265 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 TGM3Q08188 693 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 HERC3Q15034 1050 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 KIAA0040Q15053 153 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 SLC9B1Q4ZJI4 515 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 RHBDD2Q6NTF9 364 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 TUBGCP3Q96CW5 907 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 RNF31Q96EP0 1072 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 C11orf24Q96F05 449 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-201ENST00000354636 METTL2AQ96IZ6 378 aaKnown RBP23.03■■□□□ 1.28
HMGA2-201ENST00000354636 TEFMQ96QE5 360 aaKnown RBP23.03■■□□□ 1.28
HMGA2-201ENST00000354636 SIKE1Q9BRV8 207 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 TBCDQ9BTW9 1192 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 ASPSCR1Q9BZE9 553 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 WDR55Q9H6Y2 383 aaPredicted RBP23.03■■□□□ 1.28
HMGA2-201ENST00000354636 POLR1BQ9H9Y6 1135 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 KCNK13Q9HB14 408 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 LRTM1Q9HBL6 345 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 AHSPQ9NZD4 102 aa23.03■■□□□ 1.28
HMGA2-201ENST00000354636 SPTBN2O15020 2390 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 SRRM3A6NNA2 597 aaPredicted RBP23.02■■□□□ 1.28
HMGA2-201ENST00000354636 RTCAO00442 366 aaKnown RBP23.02■■□□□ 1.28
HMGA2-201ENST00000354636 FOXS1O43638 330 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 TNFSF15O95150 251 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 PRR35P0CG20 571 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 DRD4P21917 467 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 EPHA3P29320 983 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 BSGP35613 385 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 TSFMP43897 325 aaKnown RBP23.02■■□□□ 1.28
HMGA2-201ENST00000354636 GABREP78334 506 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 AP5B1Q2VPB7 878 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 TMEM164Q5U3C3 297 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 OR4C11Q6IEV9 310 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 TTLL10Q6ZVT0 673 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 LARP4Q71RC2 724 aaKnown RBP eCLIP23.02■■□□□ 1.28
HMGA2-201ENST00000354636 PRSS41Q7RTY9 318 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 SLC38A9Q8NBW4 561 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 MVB12AQ96EY5 273 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 PPP3R2Q96LZ3 170 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 QRFPRQ96P65 431 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 AKTIPQ9H8T0 292 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 ACTR5Q9H9F9 607 aaPredicted RBP23.02■■□□□ 1.28
HMGA2-201ENST00000354636 C1orf109Q9NX04 203 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 DHCR7Q9UBM7 475 aaKnown RBP23.02■■□□□ 1.28
HMGA2-201ENST00000354636 DCTN4Q9UJW0 460 aa23.02■■□□□ 1.28
HMGA2-201ENST00000354636 A0A0G2JN53 185 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 C9orf172C9J069 976 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 DIAPH2O60879 1101 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 PEX11AO75192 247 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 VPS4BO75351 444 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 B3GALT4O96024 378 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 IL1RNP18510 177 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 IDH3AP50213 366 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 CAMK2BQ13554 666 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 DEFB134Q4QY38 66 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 ATP6AP1LQ52LC2 224 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 RFTN2Q52LD8 501 aaPredicted RBP23.01■■□□□ 1.27
HMGA2-201ENST00000354636 SPIN4Q56A73 249 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 C6orf136Q5SQH8 315 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 PDSS2Q86YH6 399 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 DTWD1Q8N5C7 304 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 C1orf52Q8N6N3 182 aaKnown RBP23.01■■□□□ 1.27
HMGA2-201ENST00000354636 EBF4Q9BQW3 602 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 SORBS1Q9BX66 1292 aaKnown RBP23.01■■□□□ 1.27
HMGA2-201ENST00000354636 B3GNT4Q9C0J1 378 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 EPN3Q9H201 632 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 SIRT5Q9NXA8 310 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 GIMAP2Q9UG22 337 aa23.01■■□□□ 1.27
HMGA2-201ENST00000354636 DSCR3O14972 297 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 GALR3O60755 368 aaPredicted RBP23■■□□□ 1.27
HMGA2-201ENST00000354636 SEC22BO75396 215 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 NTRK1P04629 796 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 HBQ1P09105 142 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 ZNF28P17035 718 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 BTN3A2P78410 334 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 ACSM2AQ08AH3 577 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 GALNTL6Q49A17 601 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 ACSM2BQ68CK6 577 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 ZNF793Q6ZN11 406 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 COMMD6Q7Z4G1 85 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 ZFAND4Q86XD8 727 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 STON2Q8WXE9 905 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 NSRP1Q9H0G5 558 aaKnown RBP23■■□□□ 1.27
HMGA2-201ENST00000354636 DDX31Q9H8H2 851 aaKnown RBP23■■□□□ 1.27
HMGA2-201ENST00000354636 ANKHQ9HCJ1 492 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 KLK13Q9UKR3 277 aa23■■□□□ 1.27
HMGA2-201ENST00000354636 WASF3Q9UPY6 502 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms