RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 ANKRD34BA5PLL1 514 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CSF2P04141 144 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 RARRES1P49788 294 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ART1P52961 327 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 PYROXD2Q8N2H3 581 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 OR4F6Q8NGB9 312 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 P2RY11Q96G91 374 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 OR52A5Q9H2C5 316 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ITM2CQ9NQX7 267 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 AQP9O43315 295 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 HEXBP07686 556 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 PKMP14618 531 aaKnown RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 DSC3Q14574 896 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 SPHARQ15513 63 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 SLC27A1Q6PCB7 646 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ARHGAP12Q8IWW6 846 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 NDNFQ8TB73 568 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 LIN7BQ9HAP6 207 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 SLAMF7Q9NQ25 335 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 GPATCH2LQ9NWQ4 482 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 TXNL1O43396 289 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 AP1G1O43747 822 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 LRG1P02750 347 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 RHCEP18577 417 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ORC1Q13415 861 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 TBC1D25Q3MII6 688 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 FAM183BPQ6ZVS7 135 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF550Q7Z398 422 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 OR6Q1Q8NGQ2 317 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 RSPRY1Q96DX4 576 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 NELL2Q99435 816 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 TPT1P8Q9HAU6 139 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 TVP23BQ9NYZ1 205 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CNOT2Q9NZN8 540 aaKnown RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 IFT172Q9UG01 1749 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 HBE1P02100 147 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 PFKPQ01813 784 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 GALNT1Q10472 559 aaPredicted RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 DNASE1L2Q92874 299 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 FCRL3Q96P31 734 aaPredicted RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 POP1Q99575 1024 aaKnown RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 MINDY3Q9H8M7 445 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 C14orf119Q9NWQ9 140 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ANKRD36CQ5JPF3 1778 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ADRB1P08588 477 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 FRKP42685 505 aaPredicted RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CAPSQ13938 189 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 DPY19L2P1Q6NXN4 242 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 PIP5K1AQ99755 562 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ARHGAP23Q9P227 1491 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CA5AP35218 305 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 SPAM1P38567 509 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 SSR2P43308 183 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 RNF130Q86XS8 419 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 TFAP2CQ92754 450 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 DNAJC19Q96DA6 116 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 PRMT6Q96LA8 375 aaPredicted RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CENPOQ9BU64 300 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 FBXO7Q9Y3I1 522 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 A0A1W2PS29 197 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 NPRL3Q12980 569 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 RAB31Q13636 194 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ELOAQ14241 798 aaKnown RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ARL9Q6T311 187 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 DEFB106AQ8N104 65 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CXorf40BQ96DE9 158 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 MUS81Q96NY9 551 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 PCDHGA5Q9Y5G8 931 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CNTNAP1P78357 1384 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF705FA8MVS1 300 aaPredicted RBP12.21□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF705DP0CH99 300 aaPredicted RBP12.21□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF705BP0CI00 300 aaPredicted RBP12.21□□□□□ -0.45
COL6A3-203ENST00000353578 CDC20Q12834 499 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 RBPMSQ93062 196 aaKnown RBP12.21□□□□□ -0.45
COL6A3-203ENST00000353578 MFFQ9GZY8 342 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 CTPS2Q9NRF8 586 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF705GA8MUZ8 300 aaPredicted RBP12.21□□□□□ -0.45
COL6A3-203ENST00000353578 TYROBPO43914 113 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 CTNNB1P35222 781 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 STXBP1P61764 594 aaKnown RBP12.21□□□□□ -0.45
COL6A3-203ENST00000353578 CTBP1Q13363 440 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 SYT14Q8NB59 555 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 KCNC2Q96PR1 638 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 NPIPA7E9PJI5 369 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 ARPC5O15511 151 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 FKTNO75072 461 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 B3GAT3O94766 335 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 ASGR1P07306 291 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 NPIPA8P0DM63 369 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 BAMBIQ13145 260 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 SGCGQ13326 291 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 ZDHHC24Q6UX98 284 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 SNX29P2Q8IUI4 249 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 SLC43A3Q8NBI5 491 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF563Q8TA94 476 aa12.21□□□□□ -0.45
COL6A3-203ENST00000353578 SLC2A14Q8TDB8 520 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms