RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TTC34A8MYJ7 566 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 SORBS2O94875 1100 aaKnown RBP15.45■□□□□ 0.06
PTPN11-201ENST00000351677 IL3P08700 152 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 BMP8BP34820 402 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 SLC35F1Q5T1Q4 408 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 TMEM236Q5W0B7 351 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 FBXO42Q6P3S6 717 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 BMP8AQ7Z5Y6 402 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 DEFB119Q8N690 84 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 FBXO27Q8NI29 283 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 COQ8BQ96D53 544 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 FAM129BQ96TA1 746 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 RBMXL2O75526 392 aaKnown RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 LDOC1O95751 146 aaPredicted RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 PFKMP08237 780 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ATP5A1P25705 553 aaKnown RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 CDKN1CP49918 316 aaPredicted RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 DNASE1L3Q13609 305 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF627Q7L945 461 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 MAPK15Q8TD08 544 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 JPH3Q8WXH2 748 aaPredicted RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ADAMTS5Q9UNA0 930 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 PUDPQ08623 228 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 COL9A2Q14055 689 aaPredicted RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ISCA2Q86U28 154 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 IL17FQ96PD4 163 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 CD180Q99467 661 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 GRXCR1A8MXD5 290 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 SOCS2O14508 198 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 C1GALT1C1LP0DN25 315 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 OR12D1P0DN82 309 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 UQCRC2P22695 453 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ADAM8P78325 824 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF423Q2M1K9 1284 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 PRRT3Q5FWE3 981 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 LINC00471Q8N535 108 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 TRAM1L1Q8N609 369 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 SLC45A3Q96JT2 553 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 BOCQ9BWV1 1114 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 CENPMQ9NSP4 180 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 NUP98P52948 1817 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 POLR2CP19387 275 aaPredicted RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 MAP3K8P41279 467 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 RNF144AP50876 292 aaPredicted RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 PM20D1Q6GTS8 502 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 NCEH1Q6PIU2 408 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 LNX2Q8N448 690 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 TTTY10Q9BZA0 68 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 IGSF5Q9NSI5 407 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 A0A0U1RQS6 177 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 C2orf92A0A1B0GVN3 265 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF860A6NHJ4 632 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 GSTT2BP0CG30 244 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 SLC15A1P46059 708 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF404Q494X3 552 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 KANK2Q63ZY3 851 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ERN2Q76MJ5 926 aaKnown RBP15.44■□□□□ 0.06
PTPN11-201ENST00000351677 B3GNT4Q9C0J1 378 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF224Q9NZL3 707 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 WDR45Q9Y484 360 aa15.44■□□□□ 0.06
PTPN11-201ENST00000351677 SETD1AO15047 1707 aaKnown RBP15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CPED1A4D0V7 1026 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 COQ9O75208 318 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CSN2P05814 226 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CBX5P45973 191 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 VMACQ2NL98 169 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 ASRGL1Q7L266 308 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TMCO2Q7Z6W1 182 aaPredicted RBP15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TSPAN33Q86UF1 283 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 MINDY2Q8NBR6 621 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 C1orf216Q8TAB5 229 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TTYH1Q9H313 450 aaPredicted RBP15.43■□□□□ 0.06
PTPN11-201ENST00000351677 ALKBH4Q9NXW9 302 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 EIF3KQ9UBQ5 218 aaKnown RBP15.43■□□□□ 0.06
PTPN11-201ENST00000351677 SCDO00767 359 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TLX3O43711 291 aaPredicted RBP15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TACSTD2P09758 323 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 MPC1LP0DKB6 136 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 NRG3P56975 720 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CBLBQ13191 982 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 MINDY1Q8N5J2 469 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 HDAC2Q92769 488 aaKnown RBP15.43■□□□□ 0.06
PTPN11-201ENST00000351677 NDC1Q9BTX1 674 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 A0A1W2PRG6 482 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 ITGA10O75578 1167 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 S100A1P23297 94 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 ENTPD1P49961 510 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TUBA1BP68363 451 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TUBA1AQ71U36 451 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 Q9N2J8 555 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TNFRSF10BO14763 440 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CD9P21926 228 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TIA1P31483 386 aaKnown RBP eCLIP15.43■□□□□ 0.06
PTPN11-201ENST00000351677 RFC2P35250 354 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 TBPL1P62380 186 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CAMK1Q14012 370 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 MOGQ16653 247 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CCDC80Q76M96 950 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 CARM1Q86X55 608 aa15.43■□□□□ 0.06
PTPN11-201ENST00000351677 OR5M3Q8NGP4 307 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms