RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 TGM3Q08188 693 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 DEFB134Q4QY38 66 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 MRPL14Q6P1L8 145 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 CHSY3Q70JA7 882 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 PRSS41Q7RTY9 318 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SYVN1Q86TM6 617 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 PDSS2Q86YH6 399 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 AMER3Q8N944 861 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 AGAP11Q8TF27 550 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 MS4A6EQ96DS6 147 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SMIM10Q96HG1 83 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 CNDP1Q96KN2 507 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 MTERF1Q99551 399 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SLC26A1Q9H2B4 701 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ACTL8Q9H568 366 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 MID1IP1Q9NPA3 183 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 DMRT3Q9NQL9 472 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 PSD3Q9NYI0 1048 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SNX6Q9UNH7 406 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 NAALAD2Q9Y3Q0 740 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ZZEF1O43149 2961 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 A0A088AWK7 358 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SGK494L7N484 410 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 POLR3GO15318 223 aaPredicted RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 BIRC5O15392 142 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 EFSO43281 561 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ERI3O43414 337 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 NPHS1O60500 1241 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 TGFB1P01137 390 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 WT1P19544 449 aaPredicted RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 ZNF10P21506 573 aaPredicted RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 TMPRSS3P57727 454 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 RAB8AP61006 207 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 IFT88Q13099 833 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 TMEM35AQ53FP2 167 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 TRIM40Q6P9F5 258 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 NUDCD3Q8IVD9 361 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 CDYL2Q8N8U2 506 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ANKRD42Q8N9B4 389 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ZSCAN1Q8NBB4 408 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SRFBP1Q8NEF9 429 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 OR2L5Q8NG80 312 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 STARD8Q92502 1023 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 FAR2Q96K12 515 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 F2RL3Q96RI0 385 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 CENPKQ9BS16 269 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SLC29A3Q9BZD2 475 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 WDR54Q9H977 334 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 CLK4Q9HAZ1 481 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 TRPC4Q9UBN4 977 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 CTSFQ9UBX1 484 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ZNF282Q9UDV7 671 aaPredicted RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 NXT1Q9UKK6 140 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 TCFL5Q9UL49 500 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 PPT2Q9UMR5 302 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 MRPS18BQ9Y676 258 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 CCDC88CQ9P219 2028 aa13.21□□□□□ -0.29
SEC13-202ENST00000350697 DSPP15924 2871 aaKnown RBP13.21□□□□□ -0.29
SEC13-202ENST00000350697 IGLV3-12A0A075B6K2 115 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 ZNF891A8MT65 544 aaPredicted RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 MAGEB17A8MXT2 336 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 C4orf51C9J302 202 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 UBFD1O14562 309 aaKnown RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 RDH16O75452 317 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 CREG1O75629 220 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 RECKO95980 971 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 KRT6AP02538 564 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 KRT6BP04259 564 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 PTX3P26022 381 aaPredicted RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 HMOX2P30519 316 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 CCR10P46092 362 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 KRT6CP48668 564 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 NEK2P51955 445 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 PLA2G16P53816 162 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 RPS18P62269 152 aaKnown RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 RPS13P62277 151 aaKnown RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 MC1RQ01726 317 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 OCA2Q04671 838 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 NKG7Q16617 165 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 DEPDC1Q5TB30 811 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 HHATQ5VTY9 493 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 KHDRBS2Q5VWX1 349 aaKnown RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 ABHD17CQ6PCB6 329 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 RNF175Q8N4F7 328 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 METTL6Q8TCB7 284 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 SELENOMQ8WWX9 145 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 MTFMTQ96DP5 389 aaKnown RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 KCNC2Q96PR1 638 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 YIPF2Q9BWQ6 316 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 OR51B5Q9H339 312 aa13.21□□□□□ -0.3
SEC13-202ENST00000350697 MKKSQ9NPJ1 570 aaPredicted RBP13.21□□□□□ -0.3
SEC13-202ENST00000350697 NKIRAS1Q9NYS0 192 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms