RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ISLR2Q6UXK2 745 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 CPEB2Q7Z5Q1 589 aaKnown RBP14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 PDSS2Q86YH6 399 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 TEX9Q8N6V9 391 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 ADAMTS18Q8TE60 1221 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.89□□□□□ -0.037e-6■■□□□ 11.7
TSPAN4-201ENST00000346501 ATP6V1E2Q96A05 226 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 PNPLA2Q96AD5 504 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 REPS1Q96D71 796 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 WDR34Q96EX3 536 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 MFRPQ9BY79 579 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 REXO4Q9GZR2 422 aaKnown RBP14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 MAP10Q9P2G4 905 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 COPG2Q9UBF2 871 aa14.89□□□□□ -0.03
TSPAN4-201ENST00000346501 A0A1W2PQ72 361 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 DYTNA2CJ06 578 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 HMX2A2RU54 273 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 MAGEB17A8MXT2 336 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 CLDN4O14493 209 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 JRKO75564 520 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 PCNAP12004 261 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 COX6A1P12074 109 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 CASP2P42575 452 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 KCNC1P48547 511 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 ABRAXAS2Q15018 415 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 NADK2Q4G0N4 442 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 CRB2Q5IJ48 1285 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 CHSY3Q70JA7 882 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 TMEM151BQ8IW70 566 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 IQCKQ8N0W5 287 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 OR2L5Q8NG80 312 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 CREB3L4Q8TEY5 395 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 DCAKDQ8WVC6 231 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 ISL2Q96A47 359 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 LMF1Q96S06 567 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 LPAR4Q99677 370 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 NPLQ9BXD5 320 aaPredicted RBP14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 ZNF700Q9H0M5 742 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 RHBGQ9H310 441 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 ACTR8Q9H981 624 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 L2HGDHQ9H9P8 463 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 B3GNT3Q9Y2A9 372 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 PCDHGA11Q9Y5H2 935 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 SPACA6W5XKT8 324 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 SCN3AQ9NY46 2000 aa14.88□□□□□ -0.03
TSPAN4-201ENST00000346501 LRIT2A6NDA9 550 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 SYNDIG1LA6NDD5 238 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 PRMT3O60678 531 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 B4GALT2O60909 372 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 VPS4BO75351 444 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 CDC123O75794 336 aaPredicted RBP14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 PRR35P0CG20 571 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 TAC1P20366 129 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 GMPRP36959 345 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 PLA2G16P53816 162 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 OR4D2P58180 307 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 NAA30Q147X3 362 aaPredicted RBP14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 PCBP2Q15366 365 aaKnown RBP eCLIP14.87□□□□□ -0.034e-6■■■■□ 20.8
TSPAN4-201ENST00000346501 EXT1Q16394 746 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 BTBD16Q32M84 506 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 TMEM35AQ53FP2 167 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 TECRLQ5HYJ1 363 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 LIPJQ5W064 366 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 SLC6A19Q695T7 634 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 LCA5Q86VQ0 697 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 PLPP5Q8NEB5 264 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 OR5T3Q8NGG3 340 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 PTCHD1Q96NR3 888 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 KCNC2Q96PR1 638 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 WDR77Q9BQA1 342 aaPredicted RBP14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 MRPL57Q9BQC6 102 aaKnown RBP14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 RBCK1Q9BYM8 510 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 SLC29A3Q9BZD2 475 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 MRPL46Q9H2W6 279 aaKnown RBP14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 CLMPQ9H6B4 373 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 ABI3Q9P2A4 366 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 FETUBQ9UGM5 382 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 VPS4AQ9UN37 437 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 KALRNO60229 2985 aa14.87□□□□□ -0.03
TSPAN4-201ENST00000346501 MASP2O00187 686 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 UGDHO60701 494 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 SEC24DO94855 1032 aaPredicted RBP14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 MTHFD2P13995 350 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 RAP1GDS1P52306 607 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 MTTPP55157 894 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 TAS2R50P59544 299 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 OLR1P78380 273 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 MFAP5Q13361 173 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 GTF2H2Q13888 395 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 SLC29A2Q14542 456 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 UBAP2Q5T6F2 1119 aaKnown RBP14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 ABHD17BQ5VST6 288 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 GRHL2Q6ISB3 625 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 GTF2H2CQ6P1K8 395 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 ADGRD1Q6QNK2 874 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 ANKRD37Q7Z713 158 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 RBMXL3Q8N7X1 1067 aaKnown RBP14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 DNAJB14Q8TBM8 379 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 CPT1CQ8TCG5 803 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 PPP4R1Q8TF05 950 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms