RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CDCA4Q9BXL8 241 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 ZNF556Q9HAH1 456 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 HHATLQ9HCP6 504 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 ZDHHC11BP0C7U3 371 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 HNF1BP35680 557 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 ADNP2Q6IQ32 1131 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 ANKS3Q6ZW76 656 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 TSPAN33Q86UF1 283 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 NOXA1Q86UR1 476 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 VRK3Q8IV63 474 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 L3MBTL4Q8NA19 623 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 GDF15Q99988 308 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 RERGLQ9H628 205 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 C3orf14Q9HBI5 128 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 RPRD1BQ9NQG5 326 aaKnown RBP17.09■□□□□ 0.33
VHL-202ENST00000345392 ASAH2Q9NR71 780 aa17.09■□□□□ 0.33
VHL-202ENST00000345392 COCHO43405 550 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 SREBF2Q12772 1141 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 NOGQ13253 232 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 HKDC1Q2TB90 917 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 GGTA1PQ4G0N0 100 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 TRAF7Q6Q0C0 670 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 C11orf65Q8NCR3 313 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 UBASH3BQ8TF42 649 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 FAM129BQ96TA1 746 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 HTATIP2Q9BUP3 242 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 TAPBPLQ9BX59 468 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 IRF2BPLQ9H1B7 796 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 MARCH5Q9NX47 278 aa17.08■□□□□ 0.33
VHL-202ENST00000345392 C1orf226A1L170 272 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 FAM227AF5H4B4 570 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 HIST1H2AGP0C0S8 130 aaPredicted RBP17.08■□□□□ 0.32
VHL-202ENST00000345392 CD22P20273 847 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 HIST1H2ADP20671 130 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 CNR2P34972 360 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 FEN1P39748 380 aaKnown RBP17.08■□□□□ 0.32
VHL-202ENST00000345392 SLC11A1P49279 550 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 GNG2P59768 71 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 CDC42P60953 191 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 PLAG1Q6DJT9 500 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 LRRC70Q7Z2Q7 622 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 NXPE1Q8N323 547 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 SLC7A6Q92536 515 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 HIST1H2AHQ96KK5 128 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 HIST1H2AJQ99878 128 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 P2RY13Q9BPV8 354 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 H2AFJQ9BTM1 129 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 SRRQ9GZT4 340 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 KCTD5Q9NXV2 234 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 SH3BP4Q9P0V3 963 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 VPS29Q9UBQ0 182 aa17.08■□□□□ 0.32
VHL-202ENST00000345392 TRBV5-4A0A0C4DH59 114 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 ERVH48-1M5A8F1 160 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 CCNB2O95067 398 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 CHRM5P08912 532 aaPredicted RBP17.07■□□□□ 0.32
VHL-202ENST00000345392 POLR2EP19388 210 aaKnown RBP17.07■□□□□ 0.32
VHL-202ENST00000345392 CA8P35219 290 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 HYAL2Q12891 473 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 CPTPQ5TA50 214 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 RNF130Q86XS8 419 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 C9orf43Q8TAL5 461 aaPredicted RBP17.07■□□□□ 0.32
VHL-202ENST00000345392 GPATCH2Q9NW75 528 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 SMAD6O43541 496 aaKnown RBP17.07■□□□□ 0.32
VHL-202ENST00000345392 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
VHL-202ENST00000345392 ACSM2AQ08AH3 577 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 GPAT3Q53EU6 434 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 IFI44LQ53G44 452 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 ACSM2BQ68CK6 577 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 RFPL4BQ6ZWI9 263 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 NLRP8Q86W28 1048 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 GPR26Q8NDV2 337 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
VHL-202ENST00000345392 JPH3Q8WXH2 748 aaPredicted RBP17.07■□□□□ 0.32
VHL-202ENST00000345392 NECTIN4Q96NY8 510 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 FAM8A1Q9UBU6 413 aa17.07■□□□□ 0.32
VHL-202ENST00000345392 SMIM30A4D0T7 59 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 C2orf78A6NCI8 922 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 SYN3O14994 580 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 STC2O76061 302 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 ETHE1O95571 254 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 GASTP01350 101 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 YES1P07947 543 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 PCGF2P35227 344 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 SLC6A12P48065 614 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 RORCP51449 518 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 GPLD1P80108 840 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 GPR17Q13304 367 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 MRPL58Q14197 206 aaKnown RBP17.06■□□□□ 0.32
VHL-202ENST00000345392 LEXMQ3ZCV2 418 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 YIF1BQ5BJH7 314 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 DGKKQ5KSL6 1271 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 FUT10Q6P4F1 479 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 FAM131AQ6UXB0 335 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 RFLNAQ6ZTI6 216 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 SLC44A2Q8IWA5 706 aaPredicted RBP17.06■□□□□ 0.32
VHL-202ENST00000345392 SLC34A3Q8N130 599 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 AQP11Q8NBQ7 271 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 OR4K1Q8NGD4 311 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 VPS35Q96QK1 796 aa17.06■□□□□ 0.32
VHL-202ENST00000345392 CITED4Q96RK1 184 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms