RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 SCN3AQ9NY46 2000 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 C1orf226A1L170 272 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 EIF4E1BA6NMX2 242 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 CLIC1O00299 241 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 TOR1BO14657 336 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NDUFS4O43181 175 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 CTSVO60911 334 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NUDT7P0C024 238 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 PVRP15151 417 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 CD27P26842 260 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NDUFS1P28331 727 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NKG7Q16617 165 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 SPATS1Q496A3 300 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 MTX3Q5HYI7 312 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 FBXO42Q6P3S6 717 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 TLDC1Q6P9B6 456 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 TICAM1Q8IUC6 712 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 FAM46DQ8NEK8 389 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 OR10Q1Q8NGQ4 319 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 C1orf216Q8TAB5 229 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 FIG4Q92562 907 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NAF1Q96HR8 494 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 HSPA12BQ96MM6 686 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 CCDC115Q96NT0 180 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 NELL2Q99435 816 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 SEPHS2Q99611 448 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 DPH2Q9BQC3 489 aaPredicted RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 SLC6A16Q9GZN6 736 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 GPATCH2Q9NW75 528 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 FAM120CQ9NX05 1096 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 SPASTQ9UBP0 616 aa12.95□□□□□ -0.34
CDC42-202ENST00000344548 APOBEC3BQ9UH17 382 aaKnown RBP12.95□□□□□ -0.34
CDC42-202ENST00000344548 C6orf47O95873 294 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 VIPP01282 170 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 CTSEP14091 401 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 UGT2B7P16662 529 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 HPCAL1P37235 193 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 PHEXP78562 749 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 GRAMD1BQ3KR37 738 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 LPCAT2Q7L5N7 544 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 VN1R4Q7Z5H5 301 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 GALNT10Q86SR1 603 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 PAQR7Q86WK9 346 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 KCT2Q8NC54 265 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 ZNF184Q99676 751 aaPredicted RBP12.94□□□□□ -0.34
CDC42-202ENST00000344548 CENPKQ9BS16 269 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 GSDMCQ9BYG8 508 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
CDC42-202ENST00000344548 ELOVL7A1L3X0 281 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 GSAPA4D1B5 854 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 CLEC3AO75596 197 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 SEMA3DO95025 777 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 NTRK1P04629 796 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 CAPNS1P04632 268 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 CD38P28907 300 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 CMPK1P30085 196 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 TRPC1P48995 793 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 MAPK12P53778 367 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 ABATP80404 500 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 ADRM1Q16186 407 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 TBCELQ5QJ74 424 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 FCRL6Q6DN72 434 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 ENPP6Q6UWR7 440 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 MSANTD1Q6ZTZ1 278 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 PDSS2Q86YH6 399 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 TRIM48Q8IWZ4 208 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 MAFAQ8NHW3 353 aaPredicted RBP12.93□□□□□ -0.34
CDC42-202ENST00000344548 NETO1Q8TDF5 533 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 PPCDCQ96CD2 204 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 MS4A6EQ96DS6 147 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 KLHL4Q9C0H6 718 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 TM9SF3Q9HD45 589 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 ARMC1Q9NVT9 282 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 ADGRE2Q9UHX3 823 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 ACSL6Q9UKU0 697 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 SIT1Q9Y3P8 196 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 CEP192Q8TEP8 1941 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 B4DGG1 531 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 CAPN5O15484 640 aaPredicted RBP12.93□□□□□ -0.34
CDC42-202ENST00000344548 HCRTR1O43613 425 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 CKMT2P17540 419 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 MVDP53602 400 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 MAZP56270 477 aaKnown RBP12.93□□□□□ -0.34
CDC42-202ENST00000344548 RAB8AP61006 207 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 OR4C11Q6IEV9 310 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 MFSD2AQ8NA29 543 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 OR8K5Q8NH50 307 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 FAM120BQ96EK7 910 aaKnown RBP12.93□□□□□ -0.34
CDC42-202ENST00000344548 SLC29A1Q99808 456 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 SARGQ9BW04 601 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 PITHD1Q9GZP4 211 aaPredicted RBP12.93□□□□□ -0.34
CDC42-202ENST00000344548 TPT1P8Q9HAU6 139 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 PRDM7Q9NQW5 492 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 ACTR10Q9NZ32 417 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 AP1M2Q9Y6Q5 423 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 FRYLO94915 3013 aa12.93□□□□□ -0.34
CDC42-202ENST00000344548 A0A0A6YYD5 115 aa12.92□□□□□ -0.34
CDC42-202ENST00000344548 RNASET2O00584 256 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms