RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 HOXA9P31269 272 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 OMPP47874 163 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 ST3GAL3Q11203 375 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 MZT2BQ6NZ67 158 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 Q6ZSR6 202 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 PHOSPHO1Q8TCT1 267 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 RELTQ969Z4 430 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 SLC22A12Q96S37 553 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 LHX3Q9UBR4 397 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 PCTPQ9UKL6 214 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 OAS3Q9Y6K5 1087 aaKnown RBP18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 RNH1P13489 461 aaKnown RBP18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 ANKRD54Q6NXT1 300 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 FRRS1Q6ZNA5 592 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 GALNT7Q86SF2 657 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 KBTBD2Q8IY47 623 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 CWH43Q9H720 699 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 AIG1Q9NVV5 245 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 PCDHB3Q9Y5E6 796 aa18.86■□□□□ 0.61
SEMA6C-201ENST00000341697 CPSF4LA6NMK7 179 aaKnown RBP18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 ARHGEF33A8MVX0 844 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 CD72P21854 359 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 PLGLB1Q02325 96 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 SHHQ15465 462 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 ATCAYQ86WG3 371 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 PIANPQ8IYJ0 282 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 EFHD2Q96C19 240 aaPredicted RBP18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 MOCOSQ96EN8 888 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 HSH2DQ96JZ2 352 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 METTL7AQ9H8H3 244 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 TREX1Q9NSU2 369 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 STOX2Q9P2F5 926 aaPredicted RBP18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 DNMT3AQ9Y6K1 912 aaPredicted RBP18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 NUMBLQ9Y6R0 609 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 EGFLAMQ63HQ2 1017 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 C7orf57Q8NEG2 295 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 TOE1Q96GM8 510 aaKnown RBP18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 CCL26Q9Y258 94 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 CITO14578 2027 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 A0A096LPI6 279 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 SDC3O75056 442 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 SLC5A9Q2M3M2 681 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 BIRC7Q96CA5 298 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 ARFIP1P53367 373 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 KLHL22Q53GT1 634 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 FIGLAQ6QHK4 219 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 KRTCAP2Q8N6L1 136 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 PREBQ9HCU5 417 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 MAN2B2Q9Y2E5 1009 aa18.85■□□□□ 0.61
SEMA6C-201ENST00000341697 WASH3PC4AMC7 463 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 ECDO95905 644 aaPredicted RBP18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 CKMT2P17540 419 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 FBLP22087 321 aaKnown RBP18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 ACVR2AP27037 513 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 SRP54P61011 504 aaKnown RBP18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 CDKL4Q5MAI5 379 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 NT5C3BQ969T7 300 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 TMBIM1Q969X1 311 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 GIN1Q9NXP7 522 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 OAZ3Q9UMX2 235 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 CDC123O75794 336 aaPredicted RBP18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 LINGO3P0C6S8 592 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 RHDQ02161 417 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 DCTN2Q13561 401 aaKnown RBP18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 TSEN15Q8WW01 171 aaKnown RBP18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 RAB8BQ92930 207 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 HS3ST2Q9Y278 367 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 POU6F2P78424 691 aaPredicted RBP18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 GRIK2Q13002 908 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 TAZQ16635 292 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 ACVR1CQ8NER5 493 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 OR8J3Q8NGG0 315 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 KLHL6Q8WZ60 621 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 RHBDL2Q9NX52 303 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 MARK1Q9P0L2 795 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 GPR89AB7ZAQ6 455 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 SLC30A4O14863 429 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 GPR89BP0CG08 455 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 P2RY2P41231 377 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 LRP8Q14114 963 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 NANOGP8Q6NSW7 305 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 PNCKQ6P2M8 343 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 LAPTM4BQ86VI4 370 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 OR10H4Q8NGA5 316 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 NANOGQ9H9S0 305 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 BTBD3Q9Y2F9 522 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 POFUT2Q9Y2G5 429 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 COMMD3-BMI1R4GMX3 469 aa18.84■□□□□ 0.61
SEMA6C-201ENST00000341697 H3BNX3 289 aa18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 DRD2P14416 443 aa18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 PXNP49023 591 aaPredicted RBP18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 CDK3Q00526 305 aa18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 CYBRD1Q53TN4 286 aa18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 NR4A3Q92570 626 aa18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 DGCR14Q96DF8 476 aaKnown RBP18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 NADKO95544 446 aaPredicted RBP18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 FHP07954 510 aa18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 GALNT1Q10472 559 aaPredicted RBP18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 ITGADQ13349 1161 aa18.83■□□□□ 0.61
SEMA6C-201ENST00000341697 KANK2Q63ZY3 851 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms