RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ASPDHA6ND91 283 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 RASSF9O75901 435 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 TBX6O95947 436 aaPredicted RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 RPL3P39023 403 aaKnown RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 LSSP48449 732 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SHBQ15464 509 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 ANKRD26P1Q6NSI1 321 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 FAM92BQ6ZTR7 304 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 R3HCC1LQ7Z5L2 792 aaKnown RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 HPS6Q86YV9 775 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 KIAA2013Q8IYS2 634 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 ZNF655Q8N720 491 aaPredicted RBP16.54■□□□□ 0.24
CLDN4-201ENST00000340958 VPS37AQ8NEZ2 397 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 OR7A2PQ8NGA2 310 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 DNAJB14Q8TBM8 379 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 THAP11Q96EK4 314 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 TMEM74Q96NL1 305 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 KCNC2Q96PR1 638 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 ABCG4Q9H172 646 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 KLHL31Q9H511 634 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 MIEF1Q9NQG6 463 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 NLGN3Q9NZ94 848 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SLC7A8Q9UHI5 535 aa16.54■□□□□ 0.24
CLDN4-201ENST00000340958 SCAMP2O15127 329 aaKnown RBP16.53■□□□□ 0.24
CLDN4-201ENST00000340958 YKT6O15498 198 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 NUDT21O43809 227 aaKnown RBP16.53■□□□□ 0.24
CLDN4-201ENST00000340958 CTSVO60911 334 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 LRP3O75074 770 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 ANP32DO95626 131 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 SLC7A2P52569 658 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 EPHA4P54764 986 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 ZIC1Q15915 447 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 ANKRD46Q86W74 232 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 RIMKLAQ8IXN7 391 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 SLC35F3Q8IY50 421 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 RNF148Q8N7C7 305 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 Q8N9G6 341 aaPredicted RBP16.53■□□□□ 0.24
CLDN4-201ENST00000340958 CAMKVQ8NCB2 501 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 ZDHHC12Q96GR4 267 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 ITCHQ96J02 903 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 TGM7Q96PF1 710 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 GTPBP2Q9BX10 602 aaKnown RBP16.53■□□□□ 0.24
CLDN4-201ENST00000340958 TWSG1Q9GZX9 223 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 COPS7BQ9H9Q2 264 aaPredicted RBP16.53■□□□□ 0.24
CLDN4-201ENST00000340958 EVA1BQ9NVM1 165 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.53■□□□□ 0.24
CLDN4-201ENST00000340958 SLC6A14Q9UN76 642 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 DNAH14Q0VDD8 3507 aa16.53■□□□□ 0.24
CLDN4-201ENST00000340958 ADAMTS9Q9P2N4 1935 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 URADA6NGE7 173 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 PATE3B3GLJ2 98 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 MAP3K7O43318 606 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 CER1O95813 267 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 NPPAP01160 153 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 SYPP08247 313 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 GLB1P16278 677 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 TCN1P20061 433 aaPredicted RBP16.52■□□□□ 0.24
CLDN4-201ENST00000340958 TPP2P29144 1249 aaPredicted RBP16.52■□□□□ 0.24
CLDN4-201ENST00000340958 BSGP35613 385 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 MTTPP55157 894 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 FOXM1Q08050 763 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 PWP1Q13610 501 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 SF3A2Q15428 464 aaKnown RBP16.52■□□□□ 0.24
CLDN4-201ENST00000340958 AMZ1Q400G9 498 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 NKAIN2Q5VXU1 208 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 PEAR1Q5VY43 1037 aaPredicted RBP16.52■□□□□ 0.24
CLDN4-201ENST00000340958 OR4F3Q6IEY1 312 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 TCEAL6Q6IPX3 200 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 ZCCHC8Q6NZY4 707 aaKnown RBP16.52■□□□□ 0.24
CLDN4-201ENST00000340958 DNAJC14Q6Y2X3 702 aaPredicted RBP16.52■□□□□ 0.24
CLDN4-201ENST00000340958 NET1Q7Z628 596 aaPredicted RBP16.52■□□□□ 0.24
CLDN4-201ENST00000340958 MINDY1Q8N5J2 469 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 OR2L5Q8NG80 312 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 TCEAL3Q969E4 200 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 PPCDCQ96CD2 204 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 MS4A6EQ96DS6 147 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 DUSP26Q9BV47 211 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 REEP4Q9H6H4 257 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 MYNNQ9NPC7 610 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 ATAD3AQ9NVI7 634 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 KLHL3Q9UH77 587 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 ADAM29Q9UKF5 820 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 PADI4Q9UM07 663 aa16.52■□□□□ 0.24
CLDN4-201ENST00000340958 HEATR5BQ9P2D3 2071 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 CEP250Q9BV73 2442 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 SLC9B1P1A6NJY1 282 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 NVLO15381 856 aaKnown RBP16.52■□□□□ 0.23
CLDN4-201ENST00000340958 PRAMEF10O60809 474 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 IL3P08700 152 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 MYF5P13349 255 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 ST6GAL1P15907 406 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 ME2P23368 584 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 ALDH9A1P49189 494 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 CCT8P50990 548 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 OR1D5P58170 312 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 RAB8AP61006 207 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 KPNB1Q14974 876 aaKnown RBP16.52■□□□□ 0.23
CLDN4-201ENST00000340958 HEPACAMQ14CZ8 416 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 CSRP2Q16527 193 aa16.52■□□□□ 0.23
CLDN4-201ENST00000340958 UGT8Q16880 541 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms