RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GALNT16Q8N428 558 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 RIBC1Q8N443 379 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF843Q8N446 348 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 OR2L5Q8NG80 312 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 EPS8L3Q8TE67 593 aaKnown RBP18.14■□□□□ 0.49
SYNE4-202ENST00000340477 PPP4R1Q8TF05 950 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 CAVIN3Q969G5 261 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 PEX11GQ96HA9 241 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 ROGDIQ9GZN7 287 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 PCDHGB7Q9Y5F8 929 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 PCDHGA11Q9Y5H2 935 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 TLN1Q9Y490 2541 aaKnown RBP18.14■□□□□ 0.49
SYNE4-202ENST00000340477 SPTA1P02549 2419 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 NSG1A0A0A6YYJ2 146 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 LRIT2A6NDA9 550 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 E2F3O00716 465 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 B3GALT2O43825 422 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 PRAMEF4O60810 478 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 HPP00738 406 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 FHP07954 510 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 NUDT17P0C025 328 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 CD22P20273 847 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 AP2B1P63010 937 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 BTN3A2P78410 334 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 HYAL2Q12891 473 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 E2F2Q14209 437 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 RCN2Q14257 317 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 PRAMEF9Q5VWM5 478 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 FAAH2Q6GMR7 532 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 ASB18Q6ZVZ8 466 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 CHSY3Q70JA7 882 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 LAPTM4BQ86VI4 370 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 LAS2Q8IYD9 372 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 OR11G2Q8NGC1 345 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 OR5T3Q8NGG3 340 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 TBC1D20Q96BZ9 403 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 MS4A6EQ96DS6 147 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 MAGEB10Q96LZ2 347 aaPredicted RBP18.13■□□□□ 0.49
SYNE4-202ENST00000340477 RBCK1Q9BYM8 510 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 KLHL31Q9H511 634 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 RIC8BQ9NVN3 520 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF490Q9ULM2 529 aaPredicted RBP18.13■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF451Q9Y4E5 1061 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 MED13Q9UHV7 2174 aa18.13■□□□□ 0.49
SYNE4-202ENST00000340477 TLDC2A0PJX2 215 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 LRRC14BA6NHZ5 514 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 A8MT66 165 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 CHST10O43529 356 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 CEACAM4O75871 244 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 C1QL1O75973 258 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 CLDN9O95484 217 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 UQCRHP07919 91 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 HNRNPH1P31943 449 aaKnown RBP18.12■□□□□ 0.49
SYNE4-202ENST00000340477 CCT5P48643 541 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 PLA2G16P53816 162 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 SNRPNP63162 240 aaKnown RBP18.12■□□□□ 0.49
SYNE4-202ENST00000340477 OLR1P78380 273 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 EEF1A2Q05639 463 aaKnown RBP18.12■□□□□ 0.49
SYNE4-202ENST00000340477 DDX39BQ13838 428 aaKnown RBP18.12■□□□□ 0.49
SYNE4-202ENST00000340477 TMEM35AQ53FP2 167 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 VWA5B1Q5TIE3 1220 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 NDUFAF7Q7L592 441 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 HPS6Q86YV9 775 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 SLC22A9Q8IVM8 553 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 TMEM151BQ8IW70 566 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 OR7G3Q8NG95 312 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 ADAMTS18Q8TE60 1221 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 MZB1Q8WU39 189 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 C8orf44Q96CB5 159 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 CMTM7Q96FZ5 175 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 KCNC2Q96PR1 638 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 NPLQ9BXD5 320 aaPredicted RBP18.12■□□□□ 0.49
SYNE4-202ENST00000340477 PARD6BQ9BYG5 372 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 VN1R1Q9GZP7 353 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 NOL11Q9H8H0 719 aaKnown RBP18.12■□□□□ 0.49
SYNE4-202ENST00000340477 TMEM216Q9P0N5 145 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 PCTPQ9UKL6 214 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 SMG1Q96Q15 3661 aaKnown RBP18.12■□□□□ 0.49
SYNE4-202ENST00000340477 KALRNO60229 2985 aa18.12■□□□□ 0.49
SYNE4-202ENST00000340477 B8ZZF3 427 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 COPEO14579 308 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 JRKO75564 520 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 B3GALT4O96024 378 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 OTCP00480 354 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 RPS17P08708 135 aaKnown RBP18.11■□□□□ 0.49
SYNE4-202ENST00000340477 SMIM10L1P0DMW3 83 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 ATP5F1P24539 256 aaPredicted RBP18.11■□□□□ 0.49
SYNE4-202ENST00000340477 PIK3CBP42338 1070 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 RAP1GDS1P52306 607 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 MTTPP55157 894 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 MYBPC3Q14896 1274 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 ADPRMQ3LIE5 342 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 TTC19Q6DKK2 380 aaPredicted RBP18.11■□□□□ 0.49
SYNE4-202ENST00000340477 ARMC2Q8NEN0 867 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 FDCSPQ8NFU4 85 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 ZNF473Q8WTR7 871 aaKnown RBP18.11■□□□□ 0.49
SYNE4-202ENST00000340477 TM9SF4Q92544 642 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 CCDC126Q96EE4 140 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 SMIM10Q96HG1 83 aa18.11■□□□□ 0.49
SYNE4-202ENST00000340477 SERINC2Q96SA4 455 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms