RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZNF888P0CJ79 500 aaPredicted RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 SMIM10L1P0DMW3 83 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 RNH1P13489 461 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 CD46P15529 392 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 TSFMP43897 325 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 HSPA7P48741 367 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 SERPINB8P50452 374 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 SNRPNP63162 240 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 PCDH1Q08174 1060 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 HYAL2Q12891 473 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 SLBPQ14493 270 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZNF169Q14929 603 aaPredicted RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 ABRAXAS2Q15018 415 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 ACAP2Q15057 778 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 NSDHLQ15738 373 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 HIST2H2ACQ16777 129 aaPredicted RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 HIST2H2AA3Q6FI13 130 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 KLC3Q6P597 504 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 QSOX2Q6ZRP7 698 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 CNPY4Q8N129 248 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 NOA1Q8NC60 698 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 DNAJB14Q8TBM8 379 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 BRIX1Q8TDN6 353 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 ADAMTS18Q8TE60 1221 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 WNT2BQ93097 391 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 UBE2E3Q969T4 207 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 PEX11GQ96HA9 241 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 SMIM10Q96HG1 83 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 FAR2Q96K12 515 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 IMMP1LQ96LU5 166 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 MESP1Q9BRJ9 268 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 NPLQ9BXD5 320 aaPredicted RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 CD244Q9BZW8 370 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 UNKQ9C0B0 810 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 RNF32Q9H0A6 362 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 ALG9Q9H6U8 611 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZBTB20Q9HC78 741 aaPredicted RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 LANCL2Q9NS86 450 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 IGSF5Q9NSI5 407 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 DMGDHQ9UI17 866 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 IKBKGQ9Y6K9 419 aa12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 FLNBO75369 2602 aaKnown RBP12.57□□□□□ -0.4
SIRPB3P-201ENST00000340424 CLEC18AA5D8T8 446 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZNF860A6NHJ4 632 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 ANKDD1BA6NHY2 528 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CDK2AP1O14519 115 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CHST10O43529 356 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZIC2O95409 532 aaPredicted RBP12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 INHBAP08476 426 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 MYBL2P10244 700 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CNTFP26441 200 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 SERPINB1P30740 379 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CASP2P42575 452 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 SERPINB9P50453 376 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CBX1P83916 185 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 RHAGQ02094 409 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 TGM3Q08188 693 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 E2F2Q14209 437 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 ADPRMQ3LIE5 342 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 XKR6Q5GH73 641 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 MROH9Q5TGP6 573 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 METTL2BQ6P1Q9 378 aaKnown RBP12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CLEC18BQ6UXF7 455 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 ANKRD37Q7Z713 158 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CUZD1Q86UP6 607 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 FAM26EQ8N5C1 309 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 SNX31Q8N9S9 440 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CLEC18CQ8NCF0 446 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 OR5T3Q8NGG3 340 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 M1APQ8TC57 530 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 IFT81Q8WYA0 676 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 PSMF1Q92530 271 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 HAS2Q92819 552 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 SNRNP40Q96DI7 357 aaKnown RBP12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 ATOH8Q96SQ7 321 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 LPAR4Q99677 370 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 RHBGQ9H310 441 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 CDC42EP4Q9H3Q1 356 aaKnown RBP12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 SNX15Q9NRS6 342 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 AGPAT4Q9NRZ5 378 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 LUZP4Q9P127 313 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 PTGFRNQ9P2B2 879 aa12.56□□□□□ -0.4
SIRPB3P-201ENST00000340424 TRAV17A0A0B4J275 112 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 LRIT2A6NDA9 550 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 SUPT3HB4E1H0 165 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 K7EPI3 171 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 CCNT2O60583 730 aaKnown RBP12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 PRMT3O60678 531 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 SUPT3HO75486 399 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 KLHL2O95198 593 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 C2P06681 752 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 TYK2P29597 1187 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ECHS1P30084 290 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 EFNA3P52797 238 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 RAB8AP61006 207 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 ARG2P78540 354 aa12.55□□□□□ -0.4
SIRPB3P-201ENST00000340424 IRF8Q02556 426 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms