RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TRAF3Q13114 568 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 CPSF6Q16630 551 aaKnown RBP eCLIP14.42□□□□□ -0.1
UBE3B-201ENST00000340074 ADPRMQ3LIE5 342 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 CCDC153Q494R4 210 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 ZNF678Q5SXM1 525 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 CPZQ66K79 652 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 NIPAL1Q6NVV3 410 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 SRRM1Q8IYB3 904 aaKnown RBP14.42□□□□□ -0.1
UBE3B-201ENST00000340074 RNF175Q8N4F7 328 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 EXD3Q8N9H8 876 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 L3MBTL4Q8NA19 623 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 ZNF473Q8WTR7 871 aaKnown RBP14.42□□□□□ -0.1
UBE3B-201ENST00000340074 WBP1Q96G27 269 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 NTMT1Q9BV86 223 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 MS4A8Q9BY19 250 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 REXO4Q9GZR2 422 aaKnown RBP14.42□□□□□ -0.1
UBE3B-201ENST00000340074 SEMA3GQ9NS98 782 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 C14orf105Q9NVL8 296 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 C3orf18Q9UK00 162 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 PCDHGA11Q9Y5H2 935 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 HS3ST3B1Q9Y662 390 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 IDSB3KWA1 339 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 G3V2L1 256 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 H0YIV9 168 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 PPP6CO00743 305 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ERI3O43414 337 aaKnown RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 PLIN3O60664 434 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 DNAJB5O75953 348 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SUPT7LO94864 414 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 TGFB1P01137 390 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 IGHEP01854 428 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 MYL2P10916 166 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 IMPDH1P20839 514 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 PLA2G16P53816 162 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 PRKAA2P54646 552 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 BTN3A2P78410 334 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 CLCQ05315 142 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 DDX39BQ13838 428 aaKnown RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 RBBP7Q16576 425 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 KRT71Q3SY84 523 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 UNC50Q53HI1 259 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SOWAHCQ53LP3 525 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ZYG11AQ6WRX3 759 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SLC22A9Q8IVM8 553 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 APLFQ8IW19 511 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 OR2L5Q8NG80 312 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 HUS1BQ8NHY5 278 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 PPP4R1Q8TF05 950 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ZBTB9Q96C00 473 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 PEX11GQ96HA9 241 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 FAR2Q96K12 515 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 IP6K3Q96PC2 410 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ZIM3Q96PE6 472 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 F2RL3Q96RI0 385 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 MTERF1Q99551 399 aaKnown RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 MESP1Q9BRJ9 268 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 TRIM55Q9BYV6 548 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ING2Q9H160 280 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 P4HTMQ9NXG6 502 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 MKL2Q9ULH7 1088 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 A0A1B0GTL3 188 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 CCDC151A5D8V7 595 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 AGPSO00116 658 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 PEX12O00623 359 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SOCS6O14544 535 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 CHST10O43529 356 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SH3BGRLO75368 114 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ERLIN1O75477 346 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 HEXBP07686 556 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SERPINB1P30740 379 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 HPDP32754 393 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 EFNA3P52797 238 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 EMP2P54851 167 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ZRSR2Q15696 482 aaKnown RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 MFSD4BQ5TF39 518 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 TRIM40Q6P9F5 258 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 KIRREL2Q6UWL6 708 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 MED25Q71SY5 747 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 BANPQ8N9N5 519 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 CCDC63Q8NA47 563 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 LSM14AQ8ND56 463 aaKnown RBP14.41□□□□□ -0.1
UBE3B-201ENST00000340074 OR4F6Q8NGB9 312 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 TRPC4APQ8TEL6 797 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SLC39A7Q92504 469 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 NACC2Q96BF6 587 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 CCDC126Q96EE4 140 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 L3HYPDHQ96EM0 354 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 APOPT1Q96IL0 206 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 RBCK1Q9BYM8 510 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 SEMA4CQ9C0C4 833 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 DMRT3Q9NQL9 472 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 MKS1Q9NXB0 559 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 ADGRE2Q9UHX3 823 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 TSC22D4Q9Y3Q8 395 aa14.41□□□□□ -0.1
UBE3B-201ENST00000340074 OR2W5A6NFC9 320 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 MASP2O00187 686 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 SPAG7O75391 227 aa14.4□□□□□ -0.1
UBE3B-201ENST00000340074 CDC123O75794 336 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-201ENST00000340074 OTCP00480 354 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms