RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ADHFE1Q8IWW8 467 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 PYROXD2Q8N2H3 581 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF527Q8NB42 609 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SYT14Q8NB59 555 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM161BQ8NDZ6 487 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 AKR7LQ8NHP1 331 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 MOSPD2Q8NHP6 518 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR152Q8TDT2 470 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 UCN3Q969E3 161 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 ZDHHC12Q96GR4 267 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 C10orf90Q96M02 699 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 DDOQ99489 341 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 MGLLQ99685 303 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 CISHQ9NSE2 258 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 NUDT15Q9NV35 164 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 MBD2Q9UBB5 411 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 NDRG3Q9UGV2 375 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SSR3Q9UNL2 185 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 A0A087WZ62 844 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 OR6C68A6NDL8 312 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 QSOX1O00391 747 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SERPINA1P01009 418 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SNHG28P0DPA3 235 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 RORCP51449 518 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 JAK3P52333 1124 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 GRIN2CQ14957 1233 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 KCNA10Q16322 511 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SSX2Q16385 188 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 UGCGQ16739 394 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 PRAMEF13Q5VWM6 474 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 CDPF1Q6NVV7 123 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 DNAJB7Q7Z6W7 309 aaPredicted RBP9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 PHYKPLQ8IUZ5 450 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 OR1M1Q8NGA1 313 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 OR2T35Q8NGX2 323 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SH3RF2Q8TEC5 729 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 THUMPD3Q9BV44 507 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 ABHD16BQ9H3Z7 469 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 ANKRD19PQ9H560 264 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 ALG9Q9H6U8 611 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 KCNK12Q9HB15 430 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 EML4Q9HC35 981 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 KRT84Q9NSB2 600 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 PSORS1C1Q9UIG5 152 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 BTNL2Q9UIR0 455 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 IKZF3Q9UKT9 509 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 MINPP1Q9UNW1 487 aa9.31□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC43A1O75387 559 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CCNDBP1O95273 360 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF682O95780 498 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RPS17P08708 135 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 FGF2P09038 288 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ANKRD34CP0C6C1 535 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 STOMP27105 288 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RAB10P61026 200 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 TSPAN5P62079 268 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 DEFA6Q01524 100 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 EMX2Q04743 252 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SKP2Q13309 424 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 IKZF1Q13422 519 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 PUM1Q14671 1186 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 OPCMLQ14982 345 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF792Q3KQV3 632 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 MZT2BQ6NZ67 158 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 NUDT13Q86X67 352 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 C10orf111Q8N326 155 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 LIX1Q8N485 282 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RELL2Q8NC24 303 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 IPMKQ8NFU5 416 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 OR2T12Q8NG77 320 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 BTN2A2Q8WVV5 523 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 FCGR1BQ92637 280 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 WDR89Q96FK6 387 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 COL21A1Q96P44 957 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC38A2Q96QD8 506 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF436Q9C0F3 470 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 MUC13Q9H3R2 512 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SDR39U1Q9NRG7 319 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 KIF25Q9UIL4 384 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SIPA1L1O43166 1804 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 DENND4AQ7Z401 1863 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 A0A0A0MRY4 1105 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CD3EAPO15446 510 aaKnown RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 PIP5K1CO60331 668 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ENDOD1O94919 500 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CCNB2O95067 398 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 MOCS2O96007 188 aaPredicted RBP9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 ALDOBP05062 364 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CRYBA1P05813 215 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 MYL3P08590 195 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SMIM6P0DI80 62 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 PIK3CGP48736 1102 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 SUOXP51687 545 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CLCN5P51795 746 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 PRMT2P55345 433 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 RAB8AP61006 207 aa9.3□□□□□ -0.92
PTCHD4-201ENST00000339488 CXCR4P61073 352 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms