RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ABHD18Q0P651 414 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 GPR50Q13585 617 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 BOP1Q14137 746 aaKnown RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 CCDC58Q4VC31 144 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SERPINA13PQ6UXR4 307 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF551Q7Z340 670 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 KIAA0907Q7Z7F0 614 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ATG16L2Q8NAA4 619 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 DNAJB8Q8NHS0 232 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 KCNH6Q9H252 994 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 OR51E2Q9H255 320 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ARL15Q9NXU5 204 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 KIF17Q9P2E2 1029 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 TBC1D24Q9ULP9 559 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 PCDHGA6Q9Y5G7 932 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 IGLV3-16A0A075B6K0 115 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 CENPXA8MT69 81 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 LOC110117498-PIK3R3F6TDL0 507 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 hCG_2039718K7EN88 272 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SLC9A3R1O14745 358 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 CAPN5O15484 640 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SEMG1P04279 462 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 CYP17A1P05093 508 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ATP1B2P14415 290 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 TIMP2P16035 220 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 PTPN6P29350 595 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SLC19A1P41440 591 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SLC15A1P46059 708 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 VLDLRP98155 873 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 BCL7AQ4VC05 210 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SGO1Q5FBB7 561 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF648Q5T619 568 aaPredicted RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 CACHD1Q5VU97 1274 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ZDHHC20Q5W0Z9 365 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 FAHD1Q6P587 224 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 VRK3Q8IV63 474 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 P3H2Q8IVL5 708 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 PIK3R3Q92569 461 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ULK4Q96C45 1275 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ZFYVE19Q96K21 471 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 HRASLS5Q96KN8 279 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 Q96MT0 163 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 DEPDC7Q96QD5 511 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 TMEM246Q9BRR3 403 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 CENPOQ9BU64 300 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF106Q9H2Y7 1883 aaKnown RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 FARSBQ9NSD9 589 aaKnown RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 ADPRHL2Q9NX46 363 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 MAN2B2Q9Y2E5 1009 aa18.06■□□□□ 0.48
PSPC1-201ENST00000338910 SAMHD1Q9Y3Z3 626 aaKnown RBP18.06■□□□□ 0.48
PSPC1-201ENST00000338910 A0A1W2PQ67 120 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 AOAHP28039 575 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 DGKGP49619 791 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 CAMK2GQ13555 558 aaPredicted RBP18.05■□□□□ 0.48
PSPC1-201ENST00000338910 STARD3Q14849 445 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 C12orf40Q86WS4 652 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 GALNT12Q8IXK2 581 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 ELMO1Q92556 727 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 CCDC32Q9BV29 185 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 PLCXD1Q9NUJ7 323 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 C14orf119Q9NWQ9 140 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 ASIC5Q9NY37 505 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 FAM8A1Q9UBU6 413 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 BOLA1Q9Y3E2 137 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 GRIP1Q9Y3R0 1128 aa18.05■□□□□ 0.48
PSPC1-201ENST00000338910 LOC730098B7Z3J9 87 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 STK16O75716 305 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 CBSLP0DN79 551 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 CYP2A6P11509 494 aaPredicted RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 VIPR1P32241 457 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 CBSP35520 551 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 PIK3CBP42338 1070 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 GNPDA1P46926 289 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 MESP2Q0VG99 397 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 HORMAD1Q86X24 394 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 TMEM132CQ8N3T6 1108 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 BEND7Q8N7W2 519 aaPredicted RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 VN1R2Q8NFZ6 395 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 CLHC1Q8NHS4 586 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 RDH14Q9HBH5 336 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 FKBP14Q9NWM8 211 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 IL36AQ9UHA7 158 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 MAU2Q9Y6X3 613 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 KRT87PA6NCN2 255 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 FABP3P05413 133 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 CDK1P06493 297 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 ANXA5P08758 320 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 EPB42P16452 691 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 XPAP23025 273 aaPredicted RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 MLIPQ5VWP3 458 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 ZCCHC8Q6NZY4 707 aaKnown RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 UBE2R2Q712K3 238 aaPredicted RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 NRARPQ7Z6K4 114 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 DNAJC22Q8N4W6 341 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 ZNF675Q8TD23 568 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 MYDGFQ969H8 173 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 MTFMTQ96DP5 389 aaKnown RBP18.04■□□□□ 0.48
PSPC1-201ENST00000338910 OR2A14Q96R47 310 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 GDF15Q99988 308 aa18.04■□□□□ 0.48
PSPC1-201ENST00000338910 INPP5KQ9BT40 448 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms