RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ZRSR2Q15696 482 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 MEP1AQ16819 746 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 SP5Q6BEB4 398 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 CA13Q8N1Q1 262 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 TMEM52Q8NDY8 209 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 NFAM1Q8NET5 270 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 SUN3Q8TAQ9 357 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 PYROXD1Q8WU10 500 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 RUNDC3BQ96NL0 473 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 LPAR4Q99677 370 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 AIF1LQ9BQI0 150 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 ERP44Q9BS26 406 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 RNF32Q9H0A6 362 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 RHOJQ9H4E5 214 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 MMP25Q9NPA2 562 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 GRHL1Q9NZI5 618 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 ZNF490Q9ULM2 529 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 KCNE2Q9Y6J6 123 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 CENPEQ02224 2701 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 DOPEY1Q5JWR5 2465 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 ITPR2Q14571 2701 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 GABRR3A8MPY1 467 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 TGFBR3LH3BV60 316 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 NDC80O14777 642 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 PRMT3O60678 531 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 H2AFYO75367 372 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 C1QAP02745 245 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 CCDC166P0CW27 439 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 GRNP28799 593 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 PPP2R1BP30154 601 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 HNRNPH1P31943 449 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 SLC6A12P48065 614 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 HSPA7P48741 367 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 OC90Q02509 493 aaPredicted RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 SLBPQ14493 270 aaKnown RBP eCLIP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 EXT1Q16394 746 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 C16orf47Q6ZP98 133 aaPredicted RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 C3orf62Q6ZUJ4 267 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 VN1R5Q7Z5H4 357 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 RPS19BP1Q86WX3 136 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 ZNF227Q86WZ6 799 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 SPATA4Q8NEY3 305 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 ELP5Q8TE02 316 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 THAP3Q8WTV1 239 aaPredicted RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 CCT6BQ92526 530 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 RELTQ969Z4 430 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 OR1F2PQ96R84 312 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 UTP23Q9BRU9 249 aaKnown RBP12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 TMEM79Q9BSE2 394 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 ABI3Q9P2A4 366 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 SEC14L3Q9UDX4 400 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 TEKT2Q9UIF3 430 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 ASB1Q9Y576 335 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 UNC79Q9P2D8 2635 aa12.53□□□□□ -0.4
NUDCD3-201ENST00000338427 NPIPA5E9PKD4 350 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 CCL21O00585 134 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 SH3BGRLO75368 114 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 NEURL1O76050 574 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 SERPINA6P08185 405 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 PRF1P14222 555 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 CD1DP15813 335 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 IL10P22301 178 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 PLA2G16P53816 162 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 SLC12A2P55011 1212 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 CDKL1Q00532 357 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 DLG1Q12959 904 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 CBLBQ13191 982 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 TGFBIQ15582 683 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 RNFT1Q5M7Z0 435 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 NCCRP1Q6ZVX7 275 aaPredicted RBP12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 FRA10AC1Q70Z53 315 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 ABHD13Q7L211 337 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 GALNTL5Q7Z4T8 443 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 GPSM1Q86YR5 675 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 TBC1D19Q8N5T2 526 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 TRPV3Q8NET8 790 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 DNAJB8Q8NHS0 232 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 ANKRD7Q92527 254 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 LIN28AQ9H9Z2 209 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 NPIPA1Q9UND3 350 aa12.52□□□□□ -0.41
NUDCD3-201ENST00000338427 A0A1B0GUH1 482 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 TCRBV9S1A1TA0A576 114 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 ARHGAP10A1A4S6 786 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 LRIT2A6NDA9 550 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 FAM187AA6NFU0 413 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 CRYABP02511 175 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 SP1P08047 785 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 CYC1P08574 325 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 RNH1P13489 461 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 EPORP19235 508 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 CD22P20273 847 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 TPP2P29144 1249 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 NR0B1P51843 470 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 PLTPP55058 493 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 AP2B1P63010 937 aa12.51□□□□□ -0.41
NUDCD3-201ENST00000338427 HSF1Q00613 529 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms