RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 KCNJ1P48048 391 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 IST1P53990 364 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 NUP107P57740 925 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 GPR85P60893 370 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 BTG2P78543 158 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 EMC4Q5J8M3 183 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 ACAD11Q709F0 780 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 ABHD13Q7L211 337 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 CAND1Q86VP6 1230 aaKnown RBP10.73□□□□□ -0.69
CSMD2-202ENST00000338325 PALM2Q8IXS6 379 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 LMNTD2Q8IXW0 634 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 TBC1D19Q8N5T2 526 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 TMEM156Q8N614 296 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 ABHD11Q8NFV4 315 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 OR4K1Q8NGD4 311 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 OR52N2Q8NGI0 321 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 NT5CQ8TCD5 201 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 NRGNQ92686 78 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 AARSD1Q9BTE6 412 aaKnown RBP10.73□□□□□ -0.69
CSMD2-202ENST00000338325 PARVBQ9HBI1 364 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
CSMD2-202ENST00000338325 TRMT6Q9UJA5 497 aaKnown RBP10.73□□□□□ -0.69
CSMD2-202ENST00000338325 ZNF469Q96JG9 3925 aaPredicted RBP10.73□□□□□ -0.69
CSMD2-202ENST00000338325 ZCWPW2A0A1B0GU75 182 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 MAGEB16A2A368 324 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 A8MUA0 341 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 PSMD12O00232 456 aaPredicted RBP10.72□□□□□ -0.69
CSMD2-202ENST00000338325 SLC16A5O15375 505 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 KLK8O60259 260 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 PDE9AO76083 593 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 RNH1P13489 461 aaKnown RBP10.72□□□□□ -0.69
CSMD2-202ENST00000338325 NPPBP16860 134 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 HOXB4P17483 251 aaPredicted RBP10.72□□□□□ -0.69
CSMD2-202ENST00000338325 MAGEA6P43360 314 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 RGS4P49798 205 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 CLCN2P51788 898 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 FOLH1Q04609 750 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 DHX9Q08211 1270 aaKnown RBP10.72□□□□□ -0.69
CSMD2-202ENST00000338325 PMPCAQ10713 525 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 KCTD19Q17RG1 926 aaPredicted RBP10.72□□□□□ -0.69
CSMD2-202ENST00000338325 UGT3A1Q6NUS8 523 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 PAOXQ6QHF9 649 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 MDGA2Q7Z553 956 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 STRA8Q7Z7C7 330 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 TGIF2LYQ8IUE0 185 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 CLYBLQ8N0X4 340 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 APCDD1LQ8NCL9 501 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 CHDHQ8NE62 594 aaPredicted RBP10.72□□□□□ -0.69
CSMD2-202ENST00000338325 ARMC2Q8NEN0 867 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 B3GNT7Q8NFL0 401 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 OR5M3Q8NGP4 307 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 CALML6Q8TD86 181 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 EEF1AKMT1Q8WVE0 214 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 MAIP1Q8WWC4 291 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 NINJ1Q92982 152 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 FOXC2Q99958 501 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 CXXC4Q9H2H0 198 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 CLK4Q9HAZ1 481 aaKnown RBP10.72□□□□□ -0.69
CSMD2-202ENST00000338325 TIMMDC1Q9NPL8 285 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 NECTIN3Q9NQS3 549 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 FBXW2Q9UKT8 454 aa10.72□□□□□ -0.69
CSMD2-202ENST00000338325 EML6Q6ZMW3 1958 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 NIPBLQ6KC79 2804 aaeCLIP10.71□□□□□ -0.69
CSMD2-202ENST00000338325 DNAJC13O75165 2243 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
CSMD2-202ENST00000338325 ITGA10O75578 1167 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 HAUS5O94927 633 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 TUBB4AP04350 444 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 MLNP12872 115 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 VPS41P49754 854 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 SSR4P51571 173 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 TERF2Q15554 542 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 TRIP13Q15645 432 aaPredicted RBP10.71□□□□□ -0.69
CSMD2-202ENST00000338325 PHKG1Q16816 387 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 ANKRD22Q5VYY1 191 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 DUPD1Q68J44 220 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 KIAA0408Q6ZU52 694 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 MYO1HQ8N1T3 1032 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 UTP15Q8TED0 518 aaKnown RBP10.71□□□□□ -0.69
CSMD2-202ENST00000338325 PYCR2Q96C36 320 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 DEFB127Q9H1M4 99 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 C20orf96Q9NUD7 363 aaPredicted RBP10.71□□□□□ -0.69
CSMD2-202ENST00000338325 ZFATQ9P243 1243 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 ZFP69BQ9UJL9 534 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 FBXO5Q9UKT4 447 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 GUCA1BQ9UMX6 200 aa10.71□□□□□ -0.69
CSMD2-202ENST00000338325 PRRC2AP48634 2157 aaKnown RBP10.71□□□□□ -0.7
CSMD2-202ENST00000338325 NAV3Q8IVL0 2385 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 ARHGAP21Q5T5U3 1957 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 PABPN1LA6NDY0 278 aaKnown RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 URADA6NGE7 173 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 NPIPA2E9PIF3 369 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 NPIPA3F8WFD2 350 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 ACOT7O00154 380 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 MYO1DO94832 1006 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 FGGP02679 453 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 HIST1H2AGP0C0S8 130 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-202ENST00000338325 HIST1H2ADP20671 130 aa10.7□□□□□ -0.7
CSMD2-202ENST00000338325 AHRP35869 848 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms