RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 WDR37Q9Y2I8 494 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 J3QLW9 94 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 TRIM3O75382 744 aaPredicted RBP13.28□□□□□ -0.28
RTN4-202ENST00000337526 ADH5P11766 374 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 ZNF19P17023 458 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 IL12BP29460 328 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 IST1P53990 364 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 MAZP56270 477 aaKnown RBP13.28□□□□□ -0.28
RTN4-202ENST00000337526 OR12D2P58182 307 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 MAB21L1Q13394 359 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 CHCHD4Q8N4Q1 142 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 PNPLA1Q8N8W4 532 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 CEP76Q8TAP6 659 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 BRD7Q9NPI1 651 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 MED11Q9P086 117 aa13.28□□□□□ -0.28
RTN4-202ENST00000337526 RENP00797 406 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 CELP19835 753 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 BMP8BP34820 402 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 MASP1P48740 699 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 NPRL3Q12980 569 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 PPIGQ13427 754 aaKnown RBP eCLIP13.27□□□□□ -0.28
RTN4-202ENST00000337526 NUMA1Q14980 2115 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 PON3Q15166 354 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 C10orf62Q5T681 223 aaPredicted RBP13.27□□□□□ -0.28
RTN4-202ENST00000337526 QSOX2Q6ZRP7 698 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 BMP8AQ7Z5Y6 402 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 SCML4Q8N228 414 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 OR56A1Q8NGH5 318 aa13.27□□□□□ -0.28
RTN4-202ENST00000337526 DLGAP1O14490 977 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 TEX28O15482 410 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 HK1P19367 917 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 KCNA5P22460 613 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 RBBP4Q09028 425 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 PUM1Q14671 1186 aaKnown RBP eCLIP13.27□□□□□ -0.293e-8■□□□□ 8.3
RTN4-202ENST00000337526 BIRC8Q96P09 236 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 WDR45Q9Y484 360 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 MAP1BP46821 2468 aaKnown RBP13.27□□□□□ -0.29
RTN4-202ENST00000337526 PLOD2O00469 737 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 TSPAN4O14817 238 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 GPR32O75388 356 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 ZNF432O94892 652 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 RAB36O95755 333 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 GALTP07902 379 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 CAPN3P20807 821 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 MATN1P21941 496 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 HMGCLP35914 325 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 PM20D1Q6GTS8 502 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 DRAXINQ8NBI3 349 aaPredicted RBP13.27□□□□□ -0.29
RTN4-202ENST00000337526 SLC37A3Q8NCC5 494 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 ARNTL2Q8WYA1 636 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 GATA6Q92908 595 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 MGLLQ99685 303 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 DHRS4Q9BTZ2 278 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 DPAGT1Q9H3H5 408 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 COPS7AQ9UBW8 275 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 RGS17Q9UGC6 210 aaPredicted RBP13.27□□□□□ -0.29
RTN4-202ENST00000337526 KCNK6Q9Y257 313 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 HSPB11Q9Y547 144 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 GLOD5A6NK44 160 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 H7BY64 318 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 SCRN3Q0VDG4 424 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 PON2Q15165 354 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 ZNF789Q5FWF6 425 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 NUP54Q7Z3B4 507 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
RTN4-202ENST00000337526 CAMKVQ8NCB2 501 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 NRG4Q8WWG1 115 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 TRUB1Q8WWH5 349 aaKnown RBP13.27□□□□□ -0.29
RTN4-202ENST00000337526 PRAP1Q96NZ9 151 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 SORT1Q99523 831 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 PCDHGA7Q9Y5G6 932 aa13.27□□□□□ -0.29
RTN4-202ENST00000337526 UNCXA6NJT0 531 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 MEIS3P2A8K0S8 358 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 PTGESO14684 152 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 DSG2Q14126 1118 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 ZNF234Q14588 700 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 C4orf46Q504U0 113 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 TLDC1Q6P9B6 456 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 DPY19L3Q6ZPD9 716 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 TMCO2Q7Z6W1 182 aaPredicted RBP13.26□□□□□ -0.29
RTN4-202ENST00000337526 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 FUBP1Q96AE4 644 aaKnown RBP13.26□□□□□ -0.29
RTN4-202ENST00000337526 L3HYPDHQ96EM0 354 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 SLC29A1Q99808 456 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 FUNDC2Q9BWH2 189 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 ABCG4Q9H172 646 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 POLE4Q9NR33 117 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 C14orf105Q9NVL8 296 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 AXIN1O15169 862 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 RPP14O95059 124 aaKnown RBP13.26□□□□□ -0.29
RTN4-202ENST00000337526 EDNRAP25101 427 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 CLDN8P56748 225 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 FADDQ13158 208 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 MEDAGQ5VYS4 303 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 ZNF783Q6ZMS7 281 aa13.26□□□□□ -0.29
RTN4-202ENST00000337526 SNX29P2Q8IUI4 249 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms