RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MFN2O95140 757 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 AIFM1O95831 613 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZSCAN5DPP0CG00 497 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CCL4P13236 92 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CTSEP14091 401 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 FOLR1P15328 257 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF28P17035 718 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 DESP17661 470 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CASP2P42575 452 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MAGEA1P43355 309 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ARSEP51690 589 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SUCLG1P53597 346 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 EMX1Q04741 257 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PRKAA1Q13131 559 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PCBP2Q15366 365 aaKnown RBP eCLIP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CYTH1Q15438 398 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 DLG2Q15700 870 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MOGAT2Q3SYC2 334 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 C4orf46Q504U0 113 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF628Q5EBL2 1059 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 RRP12Q5JTH9 1297 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 RRAGBQ5VZM2 374 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TTI2Q6NXR4 508 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 FAM199XQ6PEV8 388 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SHC4Q6S5L8 630 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 Q6ZSR9 355 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 C11orf57Q6ZUT1 292 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CENPUQ71F23 418 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ABHD13Q7L211 337 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CPEB2Q7Z5Q1 589 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PHYKPLQ8IUZ5 450 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF595Q8IYB9 648 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SLC22A15Q8IZD6 547 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ADGRF3Q8IZF5 1079 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PGBD3Q8N328 593 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM132CQ8N3T6 1108 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TTLQ8NG68 377 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OR5L2Q8NGL0 311 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 GPR150Q8NGU9 434 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OR14C36Q8NHC7 312 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 EXD1Q8NHP7 514 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 GABPB2Q8TAK5 448 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MCOLN3Q8TDD5 553 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 KLHL29Q96CT2 875 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TBC1D31Q96DN5 1066 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZBTB45Q96K62 511 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ADGRG7Q96K78 797 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CFAP57Q96MR6 1250 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF385AQ96PM9 386 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 OSBPL9Q96SU4 736 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 RHNO1Q9BSD3 238 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SLC26A6Q9BXS9 759 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 MEGF9Q9H1U4 602 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 C11orf68Q9H3H3 251 aaKnown RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 C12orf10Q9HB07 376 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 LANCL2Q9NS86 450 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 KRT82Q9NSB4 513 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SACM1LQ9NTJ5 587 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM30AQ9NV96 361 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 IRAK4Q9NWZ3 460 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 DNAJC28Q9NX36 388 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SENP1Q9P0U3 644 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 KLHL8Q9P2G9 620 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.4□□□□□ -2.19
LINC00643-201ENST00000334389 SARDHQ9UL12 918 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 ATG4BQ9Y4P1 393 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PCDHGC4Q9Y5F7 938 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 PCDHA13Q9Y5I0 950 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 GMEB1Q9Y692 573 aa1.4□□□□□ -2.19
LINC00643-201ENST00000334389 A0A0U1RQV1 116 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 A0A1W2PNV4 684 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 A0A1W2PPQ1 181 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ESYT3A0FGR9 886 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ADARB2-AS1A8MUL3 147 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 TTC34A8MYJ7 566 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 H7C1Q1 480 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 GCM2O75603 506 aaPredicted RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 KIAA0754O94854 1291 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 TRUB2O95900 331 aaKnown RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ECDO95905 644 aaPredicted RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ESR1P03372 595 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 GSNP06396 782 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 FGF2P09038 288 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ENO2P09104 434 aaPredicted RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 PNMA6AP0CW24 399 aaPredicted RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 MYF6P23409 242 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 CCNCP24863 283 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 PTAFRP25105 342 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 PDIA3P30101 505 aaKnown RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 SRD5A2P31213 254 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 DDIT3P35638 169 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ADH7P40394 386 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 NASPP49321 788 aaPredicted RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 MECP2P51608 486 aaKnown RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 LUMP51884 338 aaPredicted RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 KPNA2P52292 529 aaKnown RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF136P52737 540 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 MANFP55145 182 aaKnown RBP1.39□□□□□ -2.19
LINC00643-201ENST00000334389 CLDN18P56856 261 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms