RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RSC1A1Q92681 617 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 U3KQV3 271 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 GMFGO60234 142 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 RABIFP47224 123 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 DPTQ07507 201 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 CPTPQ5TA50 214 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 KANK2Q63ZY3 851 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 NOXRED1Q6NXP6 359 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 GALNT7Q86SF2 657 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 REXO4Q9GZR2 422 aaKnown RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 KLF15Q9UIH9 416 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 NINQ8N4C6 2090 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 COL4A3Q01955 1670 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 OR2W5A6NFC9 320 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 CDK9P50750 372 aaKnown RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 MANFP55145 182 aaKnown RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 RPS26P62854 115 aaKnown RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 CARTPTQ16568 116 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 PAGE3Q5JUK9 113 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 OTUD3Q5T2D3 398 aaPredicted RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 TICAM1Q8IUC6 712 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 ZC3H7AQ8IWR0 971 aaKnown RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 PPCDCQ96CD2 204 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 RNF145Q96MT1 663 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 RUBCNLQ9H714 662 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 UCKL1Q9NWZ5 548 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 MAU2Q9Y6X3 613 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 A8MUA0 341 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 KCNH1O95259 989 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 F3P13726 295 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 GLULP15104 373 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 ZNF23P17027 643 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 HSPA13P48723 471 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 ARRB1P49407 418 aaPredicted RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 PIGGQ5H8A4 983 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 FGD3Q5JSP0 725 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 SHISA6Q6ZSJ9 500 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 REPS1Q96D71 796 aa15.22■□□□□ 0.03
PDGFB-201ENST00000331163 TMEM121BQ9BXQ6 578 aaPredicted RBP15.22■□□□□ 0.03
PDGFB-201ENST00000331163 IGHV1OR15-9A0A0B4J2B8 117 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 ZNF195O14628 629 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 DFNA5O60443 496 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 ETHE1O95571 254 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 ZXDCQ2QGD7 858 aaPredicted RBP15.21■□□□□ 0.03
PDGFB-201ENST00000331163 METTL21CQ5VZV1 264 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 TNFAIP8L2Q6P589 184 aaPredicted RBP15.21■□□□□ 0.03
PDGFB-201ENST00000331163 NXPE4Q6UWF7 544 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 LARP4Q71RC2 724 aaKnown RBP eCLIP15.21■□□□□ 0.03
PDGFB-201ENST00000331163 DTWD1Q8N5C7 304 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 ISOC1Q96CN7 298 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 OR52A5Q9H2C5 316 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 MEAF6Q9HAF1 191 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 INIPQ9NRY2 104 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 FAIMQ9NVQ4 179 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 SMOXQ9NWM0 555 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 WARS2Q9UGM6 360 aaKnown RBP15.21■□□□□ 0.03
PDGFB-201ENST00000331163 FZD4Q9ULV1 537 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 PRPF19Q9UMS4 504 aaKnown RBP15.21■□□□□ 0.03
PDGFB-201ENST00000331163 SDK2Q58EX2 2172 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 TLR4O00206 839 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 CYP7B1O75881 506 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 ENO2P09104 434 aaPredicted RBP15.21■□□□□ 0.03
PDGFB-201ENST00000331163 MAPK1P28482 360 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 USP30Q70CQ3 517 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 CBR4Q8N4T8 237 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 FBXL6Q8N531 539 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 OR5K2Q8NHB8 316 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 CXorf21Q9HAI6 301 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 CLK4Q9HAZ1 481 aaKnown RBP15.21■□□□□ 0.03
PDGFB-201ENST00000331163 AHSPQ9NZD4 102 aa15.21■□□□□ 0.03
PDGFB-201ENST00000331163 SH3PXD2BA1X283 911 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 IFNA16P05015 189 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PTNP21246 168 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PARP8Q8N3A8 854 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PDLIM5Q96HC4 596 aaKnown RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 RAB23Q9ULC3 237 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 ST14Q9Y5Y6 855 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 R4GN57 208 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 IGLV3-16A0A075B6K0 115 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 A0A1W2PPC4 97 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 TSPAN11A1L157 253 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 GFYI3L273 518 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 AP1G1O43747 822 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PRAMEF4O60810 478 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 B4GALT2O60909 372 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 ATE1O95260 518 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PAPLNO95428 1278 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PGRP06401 933 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 JUPP14923 745 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 ZNF182P17025 639 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 SP140Q13342 867 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 TOR1AIP1Q5JTV8 583 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 PRAMEF9Q5VWM5 478 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 LYSMD4Q5XG99 296 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 WDR53Q7Z5U6 358 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 VPS50Q96JG6 964 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 DPH2Q9BQC3 489 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-201ENST00000331163 SPAG4Q9NPE6 437 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 CTPS2Q9NRF8 586 aa15.2■□□□□ 0.02
PDGFB-201ENST00000331163 LEF1Q9UJU2 399 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms