RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SEC22BO75396 215 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 RGS11O94810 467 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 KDM4BO94953 1096 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 LY86O95711 162 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 S100A9P06702 114 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 FGF2P09038 288 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 RPL34P49207 117 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 ATXN1P54253 815 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 RPS7P62081 194 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 KEAP1Q14145 624 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 NHLRC3Q5JS37 347 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 TCTE1Q5JU00 501 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 CERCAMQ5T4B2 595 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 BLOC1S3Q6QNY0 202 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 METTL7BQ6UX53 244 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 DLEU7Q6UYE1 221 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 USP53Q70EK8 1073 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 KRT74Q7RTS7 529 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 IL17RCQ8NAC3 791 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 ZC3HAV1LQ96H79 300 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF419Q96HQ0 510 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 DIRAS2Q96HU8 199 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 TEX37Q96LM6 180 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 MAGEB5Q9BZ81 275 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 KCNH6Q9H252 994 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 MIXL1Q9H2W2 232 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 EXOSC4Q9NPD3 245 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 THUMPD1Q9NXG2 353 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 VNN3Q9NY84 501 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 SPHK1Q9NYA1 384 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 TAS2R16Q9NYV7 291 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 DNAJC25-GNG10A0A024R161 153 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 LYRM1O43325 122 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 FPR3P25089 353 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 NMBRP28336 390 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 GJA5P36382 358 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 STAT5BP51692 787 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 MTPNP58546 118 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 ELP6Q0PNE2 266 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 RPS6KA2Q15349 733 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 KLHL22Q53GT1 634 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 CEP97Q8IW35 865 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 KLHDC8BQ8IXV7 354 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 SLC34A3Q8N130 599 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 ZFP82Q8N141 532 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 PYROXD2Q8N2H3 581 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 RNF149Q8NC42 400 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 PARK7Q99497 189 aaKnown RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 SPSB2Q99619 263 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 ZNF436Q9C0F3 470 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-201ENST00000328923 WBP1LQ9NX94 342 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 NCKAP1Q9Y2A7 1128 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 COL1A2P08123 1366 aa11.42□□□□□ -0.58
SHMT2-201ENST00000328923 MCM3APO60318 1980 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 TMEM82A0PJX8 343 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 LCHNA4D1U4 455 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 TUBAL3A6NHL2 446 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 A8MT66 165 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 PSMD3O43242 534 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 CCNB2O95067 398 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 ARIH2O95376 493 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 LALBAP00709 142 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 CXCL3P19876 107 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 TRHRP34981 398 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 LBX1P52954 281 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 CSNK2BP67870 215 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 TSTQ16762 297 aaKnown RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 FAM74A1Q5RGS3 127 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 MZT2BQ6NZ67 158 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 GCNT7Q6ZNI0 430 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 TRMT11Q7Z4G4 463 aaKnown RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 KLHL36Q8N4N3 616 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 C19orf18Q8NEA5 215 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 ATP6V1C2Q8NEY4 427 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 LPCAT1Q8NF37 534 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 WDR20Q8TBZ3 569 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 GPR152Q8TDT2 470 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 CA5BP1Q8WTZ4 195 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 NXPE2Q96DL1 559 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 SEMA4CQ9C0C4 833 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 ASH2LQ9UBL3 628 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 GPR160Q9UJ42 338 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 KLK4Q9Y5K2 254 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 QSOX1O00391 747 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 DCLK1O15075 740 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 STSP08842 583 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 NMBP08949 121 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 SPP1P10451 314 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 CBR1P16152 277 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 SYN1P17600 705 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 POU3F2P20265 443 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 MAPK1P28482 360 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 NOS2P35228 1153 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 MRPL19P49406 292 aaKnown RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 DAPP51397 102 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 PGDP52209 483 aa11.41□□□□□ -0.58
SHMT2-201ENST00000328923 AGFG1P52594 562 aaKnown RBP11.41□□□□□ -0.58
SHMT2-201ENST00000328923 VSX2P58304 361 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms