RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 WASH2PQ6VEQ5 465 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 B3GNT6Q6ZMB0 384 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 HORMAD2Q8N7B1 307 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 OR13J1Q8NGT2 312 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 GIMAP7Q8NHV1 300 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 DTD2Q96FN9 168 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 CINPQ9BW66 212 aaPredicted RBP6.25□□□□□ -1.41
CSTF3-201ENST00000323959 FSD1LQ9BXM9 530 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 ADGRE3Q9BY15 652 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 SOHLH2Q9NX45 425 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 HYDINQ4G0P3 5121 aa6.25□□□□□ -1.41
CSTF3-201ENST00000323959 A0A0D9SEW6 157 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 A0A1W2PPM1 405 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 TMEM114B3SHH9 223 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 TRIM49D1C9J1S8 452 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 ZNF749O43361 778 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SNX3O60493 162 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 ACPPP15309 386 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 RPS3P23396 243 aaKnown RBP eCLIP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 HPDP32754 393 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 RPA3P35244 121 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SLC19A1P41440 591 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SKIV2L2P42285 1042 aaKnown RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SLCO1A2P46721 670 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SLC5A12Q1EHB4 618 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 C11orf91Q3C1V1 193 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 NKAIN1Q4KMZ8 207 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 PLEKHM3Q6ZWE6 761 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 WDR53Q7Z5U6 358 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 GBP7Q8N8V2 638 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 TSPAN17Q96FV3 270 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 MCCC1Q96RQ3 725 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 UBTD1Q9HAC8 227 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 NT5MQ9NPB1 228 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 KLHL14Q9P2G3 628 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 KCNS2Q9ULS6 477 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 TRBV5-4A0A0C4DH59 114 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 A0A1B0GTH9 108 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 TARM1B6A8C7 271 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 EIF3FO00303 357 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 GRK2P25098 689 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 NMBRP28336 390 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 HNRNPH1P31943 449 aaKnown RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 CD86P42081 329 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 KPNA2P52292 529 aaKnown RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SESN2P58004 480 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 DNAJB13P59910 316 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 PCSK7Q16549 785 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 AWAT1Q58HT5 328 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 GKAP1Q5VSY0 366 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 GARNL3Q5VVW2 1013 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 DOK6Q6PKX4 331 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 DNM1P46Q6ZS02 220 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 NDUFAF7Q7L592 441 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 BTLAQ7Z6A9 289 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 MILR1Q7Z6M3 343 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 TFAP2DQ7Z6R9 452 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 CILP2Q8IUL8 1156 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 PELI3Q8N2H9 469 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 TTC30BQ8N4P2 665 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SPATA22Q8NHS9 363 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 RNF217Q8TC41 542 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 BCAS4Q8TDM0 211 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 CREB3L4Q8TEY5 395 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 ZNF669Q96BR6 464 aaPredicted RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 REPS1Q96D71 796 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SYT3Q9BQG1 590 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 ZNF160Q9HCG1 818 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 SLC40A1Q9NP59 571 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 DHCR7Q9UBM7 475 aaKnown RBP6.24□□□□□ -1.41
CSTF3-201ENST00000323959 MAD1L1Q9Y6D9 718 aa6.24□□□□□ -1.41
CSTF3-201ENST00000323959 COPEO14579 308 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 DVL2O14641 736 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 PRMT3O60678 531 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 TMCC1O94876 653 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 MT-CYBP00156 380 aaPredicted RBP6.23□□□□□ -1.41
CSTF3-201ENST00000323959 PROCP04070 461 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 BPGMP07738 259 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 DCDC1P59894 354 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 DSC2Q02487 901 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 LOXL1Q08397 574 aaPredicted RBP6.23□□□□□ -1.41
CSTF3-201ENST00000323959 TMEM249Q2WGJ8 235 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 SH2D4BQ5SQS7 431 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 ATG16L1Q676U5 607 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 METTL2BQ6P1Q9 378 aaKnown RBP6.23□□□□□ -1.41
CSTF3-201ENST00000323959 AFTPHQ6ULP2 937 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 TCP10LQ8TDR4 215 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 PDLIM5Q96HC4 596 aaKnown RBP6.23□□□□□ -1.41
CSTF3-201ENST00000323959 COX14Q96I36 57 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 SELENOSQ9BQE4 189 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 CHRAC1Q9NRG0 131 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 RAD18Q9NS91 495 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 RIC8BQ9NVN3 520 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 ING1Q9UK53 422 aaPredicted RBP6.23□□□□□ -1.41
CSTF3-201ENST00000323959 EMCNQ9ULC0 261 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 TENM1Q9UKZ4 2725 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 ABCA1O95477 2261 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 OR14I1A6ND48 311 aa6.23□□□□□ -1.41
CSTF3-201ENST00000323959 OR5K3A6NET4 321 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms