RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZBTB37Q5TC79 503 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF772Q68DY9 489 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RETSATQ6NUM9 610 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 USP30Q70CQ3 517 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 METTL3Q86U44 580 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CREB3L4Q8TEY5 395 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 REPS1Q96D71 796 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OR5M11Q96RB7 305 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CAMKK2Q96RR4 588 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PKMYT1Q99640 499 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MARVELD1Q9BSK0 173 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NMUR1Q9HB89 426 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 HHATLQ9HCP6 504 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ABCB9Q9NP78 766 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PRDM8Q9NQV8 689 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RAD18Q9NS91 495 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SIRT5Q9NXA8 310 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF226Q9NYT6 803 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GULP1Q9UBP9 304 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 BTAF1O14981 1849 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DIRAS1O95057 198 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ANXA3P12429 323 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 JUPP14923 745 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MAPK9P45984 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CAPZA2P47755 286 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PSEN2P49810 448 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ACLYP53396 1101 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 COX10Q12887 443 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF177Q13360 481 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MBTPS1Q14703 1052 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PTGES3Q15185 160 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RGNQ15493 299 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 C3orf38Q5JPI3 329 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SLC25A30Q5SVS4 291 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 UNC5DQ6UXZ4 953 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MACC1Q6ZN28 852 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MIB1Q86YT6 1006 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GPR152Q8TDT2 470 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MAP6Q96JE9 813 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NDUFAF4Q9P032 175 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 VPS29Q9UBQ0 182 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PCDHB8Q9UN66 801 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NRXN2Q9P2S2 1712 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MGAT4DA6NG13 374 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 FZD9O00144 591 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OR1I1O60431 355 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TPST2O60704 377 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RFPL3O75679 317 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 IGHA2P01877 340 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DNTTP04053 509 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RHOCP08134 193 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CSF3P09919 207 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OSMP13725 252 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GSTM3P21266 225 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TACR1P25103 407 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 STK19P49842 368 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 IHHQ14623 411 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF79Q15937 498 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 BAK1Q16611 211 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 COL28A1Q2UY09 1125 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 C10orf120Q5SQS8 335 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NDUFAF5Q5TEU4 345 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZDHHC20Q5W0Z9 365 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF783Q6ZMS7 281 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CAMKMTQ7Z624 323 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MRPL10Q7Z7H8 261 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ESX1Q8N693 406 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 LHFPL5Q8TAF8 219 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 HGDQ93099 445 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 FBXO32Q969P5 355 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 KCTD12Q96CX2 325 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 COPS8Q99627 209 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TINF2Q9BSI4 451 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MED28Q9H204 178 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PDFQ9HBH1 243 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RABL2AQ9UBK7 228 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TMPRSS11EQ9UL52 423 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RABL2BQ9UNT1 228 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RGPD3A6NKT7 1758 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RGPD4Q7Z3J3 1758 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 LINC00854A0A1B0GVQ3 168 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1W2PQL4 384 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM129A0AVI4 362 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 KDELR3O43731 214 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 LZTS3O60299 673 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ACSL4O60488 711 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CDRT1O95170 752 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GADD45GO95257 159 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GUCA1CO95843 209 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OR56A5P0C7T3 313 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SMPD1P17405 629 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CHMP24386 653 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NSG1P42857 185 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RAG2P55895 527 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DGKKQ5KSL6 1271 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GJC2Q5T442 439 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GPRC6AQ5T6X5 926 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ARMC12Q5T9G4 340 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CHST9Q7L1S5 443 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms