RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 PRMT3O60678 531 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 SLC25A12O75746 678 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 SMIM10L1P0DMW3 83 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 COX6B1P14854 86 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 AGAP20933 346 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 MAOAP21397 527 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 JAK1P23458 1154 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 PTGER4P35408 488 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 AHRP35869 848 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 MLF1P58340 268 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 HSF1Q00613 529 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 RGS1Q08116 209 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 GDF7Q7Z4P5 450 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 ZNF295-AS1Q8N0V1 137 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 SLC35F6Q8N357 371 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 HORMAD2Q8N7B1 307 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 GABPB2Q8TAK5 448 aaPredicted RBP16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 ATL1Q8WXF7 558 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 PDLIM5Q96HC4 596 aaKnown RBP16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 SMIM10Q96HG1 83 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 PHF12Q96QT6 1004 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 WDR83Q9BRX9 315 aaKnown RBP16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 NAT9Q9BTE0 207 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 TRIM8Q9BZR9 551 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 SLC6A16Q9GZN6 736 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 PPANQ9NQ55 473 aaKnown RBP16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 NECTIN3Q9NQS3 549 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 ASIC3Q9UHC3 531 aa16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 SETD2Q9BYW2 2564 aaPredicted RBP16.35■□□□□ 0.21
EXOSC4-201ENST00000316052 IGKV3D-11A0A0A0MRZ8 115 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 GOLGA6L10A0A0M3HER8 536 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 NME2P1O60361 137 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 MLYCDO95822 493 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 NME2P22392 152 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 ELK3P41970 407 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 KIR3DL1P43629 444 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 SMSP52788 366 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 REEP5Q00765 189 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 PPP1R3AQ16821 1122 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 QSOX2Q6ZRP7 698 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 ABHD13Q7L211 337 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 FGD2Q7Z6J4 655 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 THOC6Q86W42 341 aaKnown RBP16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 TBC1D19Q8N5T2 526 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 CPSF7Q8N684 471 aaKnown RBP16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 CFAP36Q96G28 342 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 LURAP1Q96LR2 239 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 RHBGQ9H310 441 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 TRIM45Q9H8W5 580 aaPredicted RBP16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 C2CD3Q4AC94 2353 aa16.34■□□□□ 0.21
EXOSC4-201ENST00000316052 TCRBV16S1A1N1A0A5B0 115 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 PABPN1LA6NDY0 278 aaKnown RBP16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 SAGE2PA6NJ88 616 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 A8MUA0 341 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 CDC7O00311 574 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 ADAM10O14672 748 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 ENO2P09104 434 aaPredicted RBP16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 TRHRP34981 398 aaPredicted RBP16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 CYB561P49447 251 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 HLCSP50747 726 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 SKP1P63208 163 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 FAM45BPQ6NSW5 357 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 NIPAL1Q6NVV3 410 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 NXPE4Q6UWF7 544 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 C3P1Q6ZMU1 363 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 DOLPP1Q86YN1 238 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 FAM45AQ8TCE6 357 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 CREB3L4Q8TEY5 395 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 AGAP11Q8TF27 550 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 MTFMTQ96DP5 389 aaKnown RBP16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 PELI2Q9HAT8 420 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 PRDM9Q9NQV7 894 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 ZFATQ9P243 1243 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 SNX12Q9UMY4 172 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 CHMP2BQ9UQN3 213 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 SLC22A14Q9Y267 594 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 ASB1Q9Y576 335 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 PSAT1Q9Y617 370 aa16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 INTS1Q8N201 2190 aaKnown RBP16.33■□□□□ 0.2
EXOSC4-201ENST00000316052 CDK2AP1O14519 115 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 CLDN14O95500 239 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 RNH1P13489 461 aaKnown RBP16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 ITGA8P53708 1063 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 RBBP5Q15291 538 aaKnown RBP16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 STEAP4Q687X5 459 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 TMPRSS11BQ86T26 416 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 CA13Q8N1Q1 262 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 ARMC10Q8N2F6 343 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 GHDCQ8N2G8 530 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 FAM98AQ8NCA5 519 aaKnown RBP16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 TRPV3Q8NET8 790 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 SLCO2A1Q92959 643 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 AIF1LQ9BQI0 150 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 CLK4Q9HAZ1 481 aaKnown RBP16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 CORO1CQ9ULV4 474 aaPredicted RBP16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 DYRK1BQ9Y463 629 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 MAP1AP78559 2803 aaPredicted RBP16.32■□□□□ 0.2
EXOSC4-201ENST00000316052 CES2O00748 559 aa16.31■□□□□ 0.2
EXOSC4-201ENST00000316052 SERPINA6P08185 405 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms