RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 LHX9Q9NQ69 397 aa17.55■□□□□ 0.4
CCDC43-201ENST00000315286 GPATCH2Q9NW75 528 aa17.55■□□□□ 0.4
CCDC43-201ENST00000315286 SAMD4AQ9UPU9 718 aaKnown RBP17.55■□□□□ 0.4
CCDC43-201ENST00000315286 TRIOO75962 3097 aa17.55■□□□□ 0.4
CCDC43-201ENST00000315286 G3V2T6 193 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 GNGT2O14610 69 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 PRICKLE3O43900 615 aaPredicted RBP17.54■□□□□ 0.4
CCDC43-201ENST00000315286 SERPINB1P30740 379 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 SFSWAPQ12872 951 aaKnown RBP17.54■□□□□ 0.4
CCDC43-201ENST00000315286 CCINQ13939 588 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 SPIDRQ14159 915 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 CYBRD1Q53TN4 286 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 DHRSXQ8N5I4 330 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 JPH3Q8WXH2 748 aaPredicted RBP17.54■□□□□ 0.4
CCDC43-201ENST00000315286 TM4SF18Q96CE8 201 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 SLC6A16Q9GZN6 736 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 SOX17Q9H6I2 414 aaPredicted RBP17.54■□□□□ 0.4
CCDC43-201ENST00000315286 MIEF1Q9NQG6 463 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 TAAR2Q9P1P5 351 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 CORO2BQ9UQ03 480 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 CLIC3O95833 236 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 HNRNPA2B1P22626 353 aaKnown RBP17.54■□□□□ 0.4
CCDC43-201ENST00000315286 MYF6P23409 242 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 ALDH3A2P51648 485 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 MVDP53602 400 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 MAPK12P53778 367 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 CASP9P55211 416 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 PPP1R8Q12972 351 aaKnown RBP17.54■□□□□ 0.4
CCDC43-201ENST00000315286 DAG1Q14118 895 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 VEZF1Q14119 521 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 LIN52Q52LA3 116 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 FAM180BQ6P0A1 224 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 ZDHHC13Q8IUH4 622 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 CCL4L1Q8NHW4 92 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 MAL2Q969L2 176 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 FBXL20Q96IG2 436 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 WDR92Q96MX6 357 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 SLC35A5Q9BS91 424 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 PNPLA3Q9NST1 481 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 SPHK1Q9NYA1 384 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 PNMA8BQ9ULN7 279 aaPredicted RBP17.54■□□□□ 0.4
CCDC43-201ENST00000315286 MMP17Q9ULZ9 603 aa17.54■□□□□ 0.4
CCDC43-201ENST00000315286 DNAH14Q0VDD8 3507 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 CAPN5O15484 640 aaPredicted RBP17.53■□□□□ 0.4
CCDC43-201ENST00000315286 CLPTM1O96005 669 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 ALPLP05186 524 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 PEBP1P30086 187 aaKnown RBP17.53■□□□□ 0.4
CCDC43-201ENST00000315286 FBXO43Q4G163 708 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 COX20Q5RI15 118 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 ABRAXAS1Q6UWZ7 409 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 ANGPTL8Q6UXH0 198 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 UBE3DQ7Z6J8 389 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 HS3ST5Q8IZT8 346 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 ZCCHC7Q8N3Z6 543 aaKnown RBP17.53■□□□□ 0.4
CCDC43-201ENST00000315286 FLCNQ8NFG4 579 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 CREB3L4Q8TEY5 395 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 FAM3CQ92520 227 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 SPATA9Q9BWV2 254 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 TRIM4Q9C037 500 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 FAM192AQ9GZU8 254 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 MRPS30Q9NP92 439 aaKnown RBP17.53■□□□□ 0.4
CCDC43-201ENST00000315286 EBF1Q9UH73 591 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 RAPGEFL1Q9UHV5 662 aa17.53■□□□□ 0.4
CCDC43-201ENST00000315286 TNRC18O15417 2968 aaPredicted RBP17.53■□□□□ 0.4
CCDC43-201ENST00000315286 A0A1W2PRB8 838 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 LRRC72A6NJI9 287 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 NDUFS4O43181 175 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 H6PDO95479 791 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 SERPIND1P05546 499 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 TFAP2AP05549 437 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 ATP6V1B1P15313 513 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 CAPGP40121 348 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 PAGE2Q7Z2X7 111 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 TMEM179BQ7Z7N9 219 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 ZDHHC21Q8IVQ6 265 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCDC43-201ENST00000315286 ADHFE1Q8IWW8 467 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 HMGB4Q8WW32 186 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 RGMAQ96B86 450 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 ABCG4Q9H172 646 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 CAAP1Q9H8G2 361 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 SLC6A20Q9NP91 592 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 TAS2R9Q9NYW1 312 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 ACSL6Q9UKU0 697 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.52■□□□□ 0.4
CCDC43-201ENST00000315286 COLEC10Q9Y6Z7 277 aa17.52■□□□□ 0.4
CCDC43-201ENST00000315286 MDC1Q14676 2089 aaKnown RBP17.52■□□□□ 0.4
CCDC43-201ENST00000315286 TRBC2A0A5B9 178 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 H3BNH8 94 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 APBB3O95704 486 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 HOXB6P17509 224 aaKnown RBP17.52■□□□□ 0.39
CCDC43-201ENST00000315286 DDCP20711 480 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 HTR1BP28222 390 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 CRATP43155 626 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 MAGEA2P43356 314 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 ZIK1Q3SY52 487 aaPredicted RBP17.52■□□□□ 0.39
CCDC43-201ENST00000315286 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.52■□□□□ 0.39
CCDC43-201ENST00000315286 FKBP9P1Q75LS8 142 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 VTCN1Q7Z7D3 282 aa17.52■□□□□ 0.39
CCDC43-201ENST00000315286 FBXL6Q8N531 539 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms