RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 COX20Q5RI15 118 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 SIGIRRQ6IA17 410 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 CCSAPQ6IQ19 270 aaPredicted RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 ADNP2Q6IQ32 1131 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 DCAF4L2Q8NA75 395 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 TP53I13Q8NBR0 393 aaPredicted RBP12.92□□□□□ -0.34
SKA3-202ENST00000314759 SIMC1Q8NDZ2 872 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 HCAR2Q8TDS4 363 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 OVCA2Q8WZ82 227 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 CCDC32Q9BV29 185 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 CDCA4Q9BXL8 241 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 TRPM5Q9NZQ8 1165 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 BTNL2Q9UIR0 455 aa12.92□□□□□ -0.34
SKA3-202ENST00000314759 HTTP42858 3142 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 ZNF106Q9H2Y7 1883 aaKnown RBP12.91□□□□□ -0.34
SKA3-202ENST00000314759 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 J3KTA2 159 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 GPX5O75715 221 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 MVDP53602 400 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 NKX3-2P78367 333 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 GPLD1P80108 840 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 DMC1Q14565 340 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 SSX1Q16384 188 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 XKR6Q5GH73 641 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 ZNF852Q6ZMS4 543 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 VN1R5Q7Z5H4 357 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 NPAS3Q8IXF0 933 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 STOML2Q9UJZ1 356 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 CARD8Q9Y2G2 431 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 A0A0G2JMP0 313 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 MEIOCA2RUB1 952 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 H7C4K7 107 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 OR56A5P0C7T3 313 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 ETFAP13804 333 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 CRATP43155 626 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 P2RX3P56373 397 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 PTGES3Q15185 160 aaKnown RBP12.91□□□□□ -0.34
SKA3-202ENST00000314759 TEAD4Q15561 434 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 TOR1AIP1Q5JTV8 583 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 LIPJQ5W064 366 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 ANGPTL8Q6UXH0 198 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 BBS7Q8IWZ6 715 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 CEP19Q96LK0 163 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 MCCC1Q96RQ3 725 aaPredicted RBP12.91□□□□□ -0.34
SKA3-202ENST00000314759 TSEN34Q9BSV6 310 aaKnown RBP12.91□□□□□ -0.34
SKA3-202ENST00000314759 TMEM161AQ9NX61 479 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 NUFIP1Q9UHK0 495 aaKnown RBP12.91□□□□□ -0.34
SKA3-202ENST00000314759 CORO2BQ9UQ03 480 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 AP1M2Q9Y6Q5 423 aa12.91□□□□□ -0.34
SKA3-202ENST00000314759 PCDH17O14917 1159 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 ICMTO60725 284 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 SOCS5O75159 536 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 ZNF821O75541 412 aaPredicted RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 CYP2A7P20853 494 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 IDSP22304 550 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 PPIBP23284 216 aaKnown RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 TGM4P49221 684 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 PTSQ03393 145 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 FOXD4Q12950 439 aaPredicted RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 TAB1Q15750 504 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 IFI44LQ53G44 452 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 SERPINA13PQ6UXR4 307 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 RAB43Q86YS6 212 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 C1orf52Q8N6N3 182 aaKnown RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 VPS37AQ8NEZ2 397 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 BCL7CQ8WUZ0 217 aaPredicted RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 GTPBP3Q969Y2 492 aaKnown RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 ASIC4Q96FT7 647 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 PRRG3Q9BZD7 231 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 TMPRSS11EQ9UL52 423 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 IGLV3-16A0A075B6K0 115 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 A0A0X1KG70 313 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 E7EQ34 232 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 RGS5O15539 181 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 CRYZL1O95825 349 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 ANXA4P09525 319 aaPredicted RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 OR1D2P34982 312 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 TUFMP49411 452 aaKnown RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 SMAD3P84022 425 aaKnown RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 DOC2AQ14183 400 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 YIF1BQ5BJH7 314 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 RETSATQ6NUM9 610 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 OR4A15Q8NGL6 344 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 C9orf43Q8TAL5 461 aaPredicted RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 JPH3Q8WXH2 748 aaPredicted RBP12.9□□□□□ -0.34
SKA3-202ENST00000314759 VOPP1Q96AW1 172 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 CITED4Q96RK1 184 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 TCF25Q9BQ70 676 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 TAPBPLQ9BX59 468 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 SH3BP4Q9P0V3 963 aa12.9□□□□□ -0.34
SKA3-202ENST00000314759 A0A075B6Q4 140 aa12.89□□□□□ -0.35
SKA3-202ENST00000314759 SLITRK5O94991 958 aa12.89□□□□□ -0.35
SKA3-202ENST00000314759 TIMM50Q3ZCQ8 353 aa12.89□□□□□ -0.35
SKA3-202ENST00000314759 DGKKQ5KSL6 1271 aa12.89□□□□□ -0.35
SKA3-202ENST00000314759 ARMC4Q5T2S8 1044 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms