RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 FIGLAQ6QHK4 219 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 OR2T29Q8NH02 315 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 ZUFSPQ96AP4 578 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 TGM7Q96PF1 710 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 MRPS26Q9BYN8 205 aaKnown RBP13.14□□□□□ -0.31
DDX54-202ENST00000314045 HLA-DQA2P01906 255 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 PAX7P23759 505 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
DDX54-202ENST00000314045 PSMD4P55036 377 aaKnown RBP13.14□□□□□ -0.31
DDX54-202ENST00000314045 LRP8Q14114 963 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 GANABQ14697 944 aaKnown RBP13.14□□□□□ -0.31
DDX54-202ENST00000314045 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 TIMM50Q3ZCQ8 353 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 TMEM35AQ53FP2 167 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 ATG9BQ674R7 924 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 LARP4Q71RC2 724 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■□□□□ 11.1
DDX54-202ENST00000314045 OR8K5Q8NH50 307 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 OR5P2Q8WZ92 322 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 ISL2Q96A47 359 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 GMFGO60234 142 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 DIRAS1O95057 198 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 C1orf105O95561 183 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 ANGPTL1O95841 491 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 AGR2O95994 175 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 PEX11BO96011 259 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 XKP51811 444 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 CTBSQ01459 385 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 ARHGAP40Q5TG30 622 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 FBXO27Q8NI29 283 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 TMBIM1Q969X1 311 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 PYURFQ96I23 114 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 HDAC8Q9BY41 377 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 PDE7BQ9NP56 450 aa13.14□□□□□ -0.31
DDX54-202ENST00000314045 C17orf113A0A1B0GUU1 675 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 APBB3O95704 486 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 TFPIP10646 304 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 RPS15AP62244 130 aaKnown RBP13.13□□□□□ -0.31
DDX54-202ENST00000314045 INAVAQ3KP66 663 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 SWT1Q5T5J6 900 aaKnown RBP13.13□□□□□ -0.31
DDX54-202ENST00000314045 KHDRBS2Q5VWX1 349 aaKnown RBP13.13□□□□□ -0.31
DDX54-202ENST00000314045 RTL4Q6ZR62 310 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 POMGNT2Q8NAT1 580 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 GEMIN6Q8WXD5 167 aaKnown RBP13.13□□□□□ -0.31
DDX54-202ENST00000314045 MMABQ96EY8 250 aaPredicted RBP13.13□□□□□ -0.31
DDX54-202ENST00000314045 GPATCH1Q9BRR8 931 aaKnown RBP13.13□□□□□ -0.31
DDX54-202ENST00000314045 RBCK1Q9BYM8 510 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 SMIM31A0A1B0GVY4 71 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 CAPGP40121 348 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 ZNF33BQ06732 778 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 ERMP1Q7Z2K6 904 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 NRROSQ86YC3 692 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 KLHDC8AQ8IYD2 350 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 SIX5Q8N196 739 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 CSNK1A1LQ8N752 337 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 PIGXQ8TBF5 258 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 FAM86C2PA6NEL3 165 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 LINC01565O15544 149 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 LAMP1P11279 417 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 ANXA8P13928 327 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 CSTF2P33240 577 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDX54-202ENST00000314045 CDKL1Q00532 357 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 ARHGAP19Q14CB8 494 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDX54-202ENST00000314045 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 LSMEM2Q8N112 164 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 ZSCAN32Q9NX65 697 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 ARHGEF15O94989 841 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 CCNA2P20248 432 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 IL12BP29460 328 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 DEFA1P59665 94 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 DEFA3P59666 94 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 COQ5Q5HYK3 327 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 REEP3Q6NUK4 255 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 SBSNQ6UWP8 590 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 HACD2Q6Y1H2 254 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 LMNTD1Q8N9Z9 388 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 ZDHHC1Q8WTX9 485 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 TIMM29Q9BSF4 260 aa13.13□□□□□ -0.31
DDX54-202ENST00000314045 E2F3O00716 465 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 OLFM2O95897 454 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 MAOBP27338 520 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 VMACQ2NL98 169 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 ASRGL1Q7L266 308 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 PMEPA1Q969W9 287 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 MPP4Q96JB8 637 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 HSH2DQ96JZ2 352 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 LYSMD1Q96S90 227 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 PRSS38A1L453 326 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 OR6B1O95007 311 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
DDX54-202ENST00000314045 MAGP20916 626 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 MATN1P21941 496 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
DDX54-202ENST00000314045 NFATC4Q14934 902 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 CYBRD1Q53TN4 286 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 ZNF311Q5JNZ3 666 aa13.12□□□□□ -0.31
DDX54-202ENST00000314045 LCTLQ6UWM7 567 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms