RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 KLHL18O94889 574 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ZWINTO95229 277 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ESRRBO95718 433 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 MLYCDO95822 493 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 CHN1P15882 459 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ALOX12P18054 663 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 BGNP21810 368 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 EMP3P54852 163 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 DNASE1L3Q13609 305 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ADPRMQ3LIE5 342 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 VWA2Q5GFL6 755 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ARL13AQ5H913 290 aaPredicted RBP8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ATP1A1-AS1Q5TC04 95 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ARHGAP40Q5TG30 622 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 YOD1Q5VVQ6 348 aaPredicted RBP8.62□□□□□ -1.03
PDE4D-201ENST00000309641 GARNL3Q5VVW2 1013 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 FRG2Q64ET8 278 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ZNF793Q6ZN11 406 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 AMER2Q8N7J2 671 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ENDOVQ8N8Q3 282 aaKnown RBP8.62□□□□□ -1.03
PDE4D-201ENST00000309641 TTLQ8NG68 377 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 AGR3Q8TD06 166 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 COL26A1Q96A83 441 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 FRG2BQ96QU4 278 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 C17orf62Q9BQA9 187 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 NLNQ9BYT8 704 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 DPH1Q9BZG8 443 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 PITHD1Q9GZP4 211 aaPredicted RBP8.62□□□□□ -1.03
PDE4D-201ENST00000309641 REXO4Q9GZR2 422 aaKnown RBP8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ACTL8Q9H568 366 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 GPN2Q9H9Y4 310 aaPredicted RBP8.62□□□□□ -1.03
PDE4D-201ENST00000309641 ZNF304Q9HCX3 659 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 IFT80Q9P2H3 777 aaPredicted RBP8.62□□□□□ -1.03
PDE4D-201ENST00000309641 PTGDR2Q9Y5Y4 395 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 SLC22A7Q9Y694 548 aa8.62□□□□□ -1.03
PDE4D-201ENST00000309641 RRP8O43159 456 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 GALR3O60755 368 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 NSA2O95478 260 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PDYNP01213 254 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 FURINP09958 794 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 AGXTP21549 392 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 BTN3A2P78410 334 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ERV3-1Q14264 604 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 NCF4Q15080 339 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 CHI3L2Q15782 390 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 NDUFA9Q16795 377 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ST3GAL2Q16842 350 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 GGTA1PQ4G0N0 100 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 MANEAQ5SRI9 462 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 TTC19Q6DKK2 380 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ABHD17CQ6PCB6 329 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 METTL6Q8TCB7 284 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 CCNL2Q96S94 520 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 RBCK1Q9BYM8 510 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PRM3Q9NNZ6 103 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PRDM7Q9NQW5 492 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 TRPC4Q9UBN4 977 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 TRPS1Q9UHF7 1281 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 FIS1Q9Y3D6 152 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PCSK5Q92824 1860 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 MANBAO00462 879 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PLPP1O14494 284 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 NKX2-8O15522 239 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ONECUT2O95948 504 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 GBAP04062 536 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 FBLP22087 321 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 CERS1P27544 350 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PIK3CBP42338 1070 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PKNOX1P55347 436 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 STXBP1P61764 594 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 IL10RAQ13651 578 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 RUNX2Q13950 521 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 DSG2Q14126 1118 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ABRAXAS2Q15018 415 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 NKG7Q16617 165 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 DEPDC1Q5TB30 811 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 KHDRBS2Q5VWX1 349 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 PRMT9Q6P2P2 845 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 OVCH1Q7RTY7 1134 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 CUZD1Q86UP6 607 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 OR2L5Q8NG80 312 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 STT3BQ8TCJ2 826 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 SELENOMQ8WWX9 145 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 STARD8Q92502 1023 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 UBE2E3Q969T4 207 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 GAL3ST3Q96A11 431 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 MVB12AQ96EY5 273 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 CNDP1Q96KN2 507 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 QRFPRQ96P65 431 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 SPSB2Q99619 263 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 YIPF2Q9BWQ6 316 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ZNF717Q9BY31 904 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 MRPL1Q9BYD6 325 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 SOX17Q9H6I2 414 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ANKHQ9HCJ1 492 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 ZDHHC2Q9UIJ5 367 aa8.61□□□□□ -1.03
PDE4D-201ENST00000309641 FARSAQ9Y285 508 aaKnown RBP8.61□□□□□ -1.03
PDE4D-201ENST00000309641 CACNA1GO43497 2377 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms