RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MTHFD2P13995 350 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 HNF4AP41235 474 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 AGTR2P50052 363 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 ABRAXAS2Q15018 415 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 RBBP5Q15291 538 aaKnown RBP18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 RPUSD3Q6P087 351 aaKnown RBP18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 TMIGD1Q6UXZ0 262 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 ABHD13Q7L211 337 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 TCAIMQ8N3R3 496 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 TBC1D19Q8N5T2 526 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 METTL21AQ8WXB1 218 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 MS4A6EQ96DS6 147 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 CNDP1Q96KN2 507 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 TAAR6Q96RI8 345 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 CLK4Q9HAZ1 481 aaKnown RBP18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 DNAJC11Q9NVH1 559 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 WWOXQ9NZC7 414 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 NINJ2Q9NZG7 142 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 UNC79Q9P2D8 2635 aa18.64■□□□□ 0.57
PDZRN3-202ENST00000308537 LRIT2A6NDA9 550 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 MAN1A2O60476 641 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 STK16O75716 305 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 WDPCPO95876 746 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 TUBB4AP04350 444 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 ICAM2P13598 275 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 BTG2P78543 158 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 SFT2D3Q587I9 215 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 MFSD4BQ5TF39 518 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 ZNF324BQ6AW86 544 aaPredicted RBP18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 QSOX2Q6ZRP7 698 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 CA13Q8N1Q1 262 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 GRHL3Q8TE85 626 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 QRFPRQ96P65 431 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 SLX1AQ9BQ83 275 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 SLC29A3Q9BZD2 475 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 ALG9Q9H6U8 611 aa18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 C19orf25Q9UFG5 118 aaPredicted RBP18.63■□□□□ 0.57
PDZRN3-202ENST00000308537 FAM227AF5H4B4 570 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 WFS1O76024 890 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 F10P00742 488 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 TFEBP19484 476 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 IRF9Q00978 393 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 PCDH1Q08174 1060 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 BMPR2Q13873 1038 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 RUNX2Q13950 521 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 DOC2AQ14183 400 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 SLMAPQ14BN4 828 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 NSDHLQ15738 373 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 BTBD16Q32M84 506 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 TOR1AIP1Q5JTV8 583 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 NIPAL1Q6NVV3 410 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 PAPD4Q6PIY7 484 aaKnown RBP18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 UBTD2Q8WUN7 234 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 FAR1Q8WVX9 515 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 GAL3ST3Q96A11 431 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 NXNL1Q96CM4 212 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 GPR78Q96P69 363 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 PITHD1Q9GZP4 211 aaPredicted RBP18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 RHBGQ9H310 441 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 MMP25Q9NPA2 562 aa18.62■□□□□ 0.57
PDZRN3-202ENST00000308537 BLACEA4D250 179 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 WIPF3A6NGB9 483 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 TGFBR3LH3BV60 316 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 KERAO60938 352 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 CLEC3AO75596 197 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 ALDOAP04075 364 aaKnown RBP18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 C2P06681 752 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 GSTM2P28161 218 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 CRABP2P29373 138 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 CASP2P42575 452 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 ARG2P78540 354 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 FHL5Q5TD97 284 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 TMEM52Q8NDY8 209 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 OR1N1Q8NGS0 311 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 STAG3L4Q8TBR4 150 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 M1APQ8TC57 530 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 KCTD4Q8WVF5 259 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 SEC16BQ96JE7 1060 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 CAPS2Q9BXY5 557 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 CD244Q9BZW8 370 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 ACSS3Q9H6R3 686 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 CNOT10Q9H9A5 744 aaKnown RBP18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 NECTIN3Q9NQS3 549 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 NUDT4Q9NZJ9 180 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 CD274Q9NZQ7 290 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 MAP10Q9P2G4 905 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 ERRFI1Q9UJM3 462 aaPredicted RBP18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 RNF112Q9ULX5 631 aa18.61■□□□□ 0.57
PDZRN3-202ENST00000308537 A0A0G2JN53 185 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 TCRBV16S1A1N1A0A5B0 115 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 ANKUB1A6NFN9 424 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 UBXN8O00124 270 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 KIF2AO00139 706 aaPredicted RBP18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 B4GALT2O60909 372 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 LTA4HP09960 611 aaKnown RBP18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 MAGEA12P43365 314 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 TDGF1P3P51864 188 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 HNRNPFP52597 415 aaKnown RBP18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 SLC26A5P58743 744 aa18.6■□□□□ 0.57
PDZRN3-202ENST00000308537 SKP1P63208 163 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms