RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MAL2Q969L2 176 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SLC25A51Q9H1U9 297 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 OXSMQ9NWU1 459 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 RPL36Q9Y3U8 105 aaKnown RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 POM121CA8CG34 1229 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 H3BNX3 289 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 DLX3O60479 287 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ITGA10O75578 1167 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 BEST1O76090 585 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 OPN1LWP04000 364 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 H1F0P07305 194 aaKnown RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 MPIP34949 423 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ACTR1BP42025 376 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 GPD2P43304 727 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ACTR1AP61163 376 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ZNF616Q08AN1 781 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 GRIK2Q13002 908 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 PPA1Q15181 289 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SLC16A9Q7RTY1 509 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 LMF1Q96S06 567 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 VPS29Q9UBQ0 182 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ZNF282Q9UDV7 671 aaPredicted RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 NUFIP1Q9UHK0 495 aaKnown RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 ACTL7AQ9Y615 435 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ELP2Q6IA86 826 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 NCCRP1Q6ZVX7 275 aaPredicted RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 NAT8LQ8N9F0 302 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 FAM46DQ8NEK8 389 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 TMEM80Q96HE8 168 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 TREX2Q9BQ50 279 aaPredicted RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 C17orf62Q9BQA9 187 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ZBTB20Q9HC78 741 aaPredicted RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 NLGN3Q9NZ94 848 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 FLRT1Q9NZU1 646 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 GRHPRQ9UBQ7 328 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 KERAO60938 352 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 RP2O75695 350 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 RAB36O95755 333 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 CRISP3P54108 245 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 NIPAL4Q0D2K0 466 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ENPP6Q6UWR7 440 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 PLPPR4Q7Z2D5 763 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 OR4N5Q8IXE1 308 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 UBQLNLQ8IYU4 475 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ELMOD2Q8IZ81 293 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 TMEM209Q96SK2 561 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 RGCCQ9H4X1 137 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 SRA1Q9HD15 236 aaKnown RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 P2RX2Q9UBL9 471 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 NOCTQ9UK39 431 aaKnown RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 MEMO1Q9Y316 297 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 SPDEFO95238 335 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 TMEM11P17152 192 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 CCR8P51685 355 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 DYRK1AQ13627 763 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 AMZ2Q86W34 360 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ZBED6CLQ96FA7 236 aaPredicted RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 HCN2Q9UL51 889 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 SCDO00767 359 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 PCLAFQ15004 111 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 POU4F3Q15319 338 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 TIGD5Q53EQ6 642 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 GARNL3Q5VVW2 1013 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ZNF557Q8N988 423 aaPredicted RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 OR51L1Q8NGJ5 315 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 OR13C3Q8NGS6 347 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 HSPA12BQ96MM6 686 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 SYNPO2LQ9H987 977 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 FBXO9Q9UK97 447 aaPredicted RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 GOLGA4Q13439 2230 aaKnown RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 CXCL11O14625 94 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 SCO2O43819 266 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 MPZL2O60487 215 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ENTPD6O75354 484 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 RHOQP17081 205 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 DGKGP49619 791 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 BMT2Q1RMZ1 405 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ZBED5Q49AG3 693 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 BEX5Q5H9J7 111 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 OR2T5Q6IEZ7 315 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 NCEH1Q6PIU2 408 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 OR2T29Q8NH02 315 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 PCDHB14Q9Y5E9 798 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 M0R233 179 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 TMEM107Q6UX40 140 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 LAS2Q8IYD9 372 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 PRICKLE1Q96MT3 831 aaPredicted RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 TWNKQ96RR1 684 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 RPF2Q9H7B2 306 aaKnown RBP12.23□□□□□ -0.45
USP38-201ENST00000307017 IL21RQ9HBE5 538 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 C5AR2Q9P296 337 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 ZNF541Q9H0D2 1346 aa12.23□□□□□ -0.45
USP38-201ENST00000307017 HMX3A6NHT5 357 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 NPHS1O60500 1241 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 ITGB8P26012 769 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 MYLK3Q32MK0 819 aa12.22□□□□□ -0.45
USP38-201ENST00000307017 LMX1AQ8TE12 382 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms