RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SLC35F3Q8IY50 421 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 ZNF655Q8N720 491 aaPredicted RBP16.71■□□□□ 0.27
KRT28-201ENST00000306658 CAMKVQ8NCB2 501 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 DNAJB14Q8TBM8 379 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 CCDC124Q96CT7 223 aaKnown RBP16.71■□□□□ 0.27
KRT28-201ENST00000306658 COQ8BQ96D53 544 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 TM4SF19Q96DZ7 209 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 PPM1MQ96MI6 270 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 FCRL4Q96PJ5 515 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 TBCDQ9BTW9 1192 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 RAB33BQ9H082 229 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 KCNH6Q9H252 994 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 EPB41L1Q9H4G0 881 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 KLHL31Q9H511 634 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 LHX9Q9NQ69 397 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 C1GALT1Q9NS00 363 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 SLAMF8Q9P0V8 285 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 ATP6V1HQ9UI12 483 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 L3MBTL1Q9Y468 752 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 CROCCQ5TZA2 2017 aa16.71■□□□□ 0.27
KRT28-201ENST00000306658 ERN1O75460 977 aaKnown RBP16.7■□□□□ 0.26
KRT28-201ENST00000306658 KLHL18O94889 574 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 DDX5P17844 614 aaKnown RBP16.7■□□□□ 0.26
KRT28-201ENST00000306658 ALDH4A1P30038 563 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 GPR3P46089 330 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 TRA2BP62995 288 aaKnown RBP16.7■□□□□ 0.26
KRT28-201ENST00000306658 LRRC74AQ0VAA2 488 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 KPNB1Q14974 876 aaKnown RBP16.7■□□□□ 0.26
KRT28-201ENST00000306658 ANXA8L1Q5VT79 327 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 FBXW10Q5XX13 1052 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 ZCCHC8Q6NZY4 707 aaKnown RBP16.7■□□□□ 0.26
KRT28-201ENST00000306658 ABHD17CQ6PCB6 329 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 RNF44Q7L0R7 432 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 SLC15A3Q8IY34 581 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 WDR60Q8WVS4 1066 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 AHCYL2Q96HN2 611 aaKnown RBP16.7■□□□□ 0.26
KRT28-201ENST00000306658 CGREF1Q99674 301 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 MACROD1Q9BQ69 325 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 DUSP26Q9BV47 211 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 GAREM1Q9H706 876 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 IL21RQ9HBE5 538 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 CAPN10Q9HC96 672 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 SH3BP4Q9P0V3 963 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 ABCD2Q9UBJ2 740 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 SLC6A14Q9UN76 642 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 POMPQ9Y244 141 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 MAN2B2Q9Y2E5 1009 aa16.7■□□□□ 0.26
KRT28-201ENST00000306658 A0A0C4DFX4 3053 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 STATHP02808 62 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 IL3P08700 152 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 LAMP1P11279 417 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 PIM1P11309 404 aaPredicted RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 PLIN5Q00G26 463 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 HEPACAMQ14CZ8 416 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 MANEAQ5SRI9 462 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 NANOGP8Q6NSW7 305 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 RNF148Q8N7C7 305 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 SAP25Q8TEE9 199 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 GAL3ST3Q96A11 431 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 PPCDCQ96CD2 204 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 TM4SF18Q96CE8 201 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 ZDHHC12Q96GR4 267 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 TRAPPC9Q96Q05 1148 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 AICDAQ9GZX7 198 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 SYNPO2LQ9H987 977 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 NANOGQ9H9S0 305 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 MIEF1Q9NQG6 463 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 EPHA6Q9UF33 1036 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 PACSIN3Q9UKS6 424 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 PADI4Q9UM07 663 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 PCDHA9Q9Y5H5 950 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 ARID1BQ8NFD5 2236 aaPredicted RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 A0A096LPI6 279 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 A0A0A6YYD5 115 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 PRSS51A0A1B0GVH4 220 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 ZSCAN9O15535 394 aaPredicted RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 GUCY1B2O75343 617 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 CER1O95813 267 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 FURINP09958 794 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 ST6GAL1P15907 406 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 HIST1H1TP22492 207 aaPredicted RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 TRPC1P48995 793 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 HNRNPFP52597 415 aaKnown RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 ACTR3P61158 418 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 KLC1Q07866 573 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 PDE7AQ13946 482 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 SLC9A5Q14940 896 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 TRIM61Q5EBN2 209 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 ZC3H12BQ5HYM0 836 aaKnown RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 KANSL1Q7Z3B3 1105 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 GATAD2AQ86YP4 633 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 KIAA2013Q8IYS2 634 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 C19orf47Q8N9M1 422 aaKnown RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 OR6C4Q8NGE1 309 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 NCSTNQ92542 709 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 TEFMQ96QE5 360 aaKnown RBP16.69■□□□□ 0.26
KRT28-201ENST00000306658 SH3GL1Q99961 368 aa16.69■□□□□ 0.26
KRT28-201ENST00000306658 BHLHE41Q9C0J9 482 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms