RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DNAJC9Q8WXX5 260 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 OR1E3Q8WZA6 343 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 NSUN5Q96P11 429 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 SH3GL2Q99962 352 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PCED1AQ9H1Q7 454 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 GPN2Q9H9Y4 310 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 DHRS12A0PJE2 317 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 FAM86C2PA6NEL3 165 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ELOA3DA6NLF2 546 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PDYNP01213 254 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 MYL12AP19105 171 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 AOAHP28039 575 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 GGT5P36269 586 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 GBX1Q14549 363 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 LASP1Q14847 261 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 OR4D1Q15615 310 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ELOA3BQ3SY89 546 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 REP15Q6BDI9 236 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 KIAA1211LQ6NV74 962 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 TLDC1Q6P9B6 456 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 LIMS2Q7Z4I7 341 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF605Q86T29 641 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ELOA3Q8NG57 546 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 FUBP1Q96AE4 644 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF354BQ96LW1 612 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ZIM2Q9NZV7 527 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ZFR2Q9UPR6 939 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 FAM227AF5H4B4 570 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 RTCAO00442 366 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PLRG1O43660 514 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 CHRM5P08912 532 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 TIA1P31483 386 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF41P51814 821 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PPP2CBP62714 309 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PPP2CAP67775 309 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ABHD18Q0P651 414 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 SLC9B1Q4ZJI4 515 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 NOXRED1Q6NXP6 359 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 SLC30A8Q8IWU4 369 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 MICU2Q8IYU8 434 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 SEMA6AQ9H2E6 1030 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 REEP4Q9H6H4 257 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 TRPV4Q9HBA0 871 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 FAM120CQ9NX05 1096 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 A6NL46 340 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 H3BUI4 141 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 SCRG1O75711 98 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 UNC5CO95185 931 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 FAM58BPP0C7Q3 252 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 IVDP26440 423 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 MAGEA6P43360 314 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 OLR1P78380 273 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 EMX2Q04743 252 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 GPNMBQ14956 572 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PCLAFQ15004 111 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 BTBD16Q32M84 506 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 CDKL4Q5MAI5 379 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 OTUD1Q5VV17 481 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 MINDY1Q8N5J2 469 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 PJA1Q8NG27 643 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 ROPN1LQ96C74 230 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 COL21A1Q96P44 957 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 CDADC1Q9BWV3 514 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 KLHL4Q9C0H6 718 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 EPS8L2Q9H6S3 715 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 THSD1Q9NS62 852 aa8.89□□□□□ -0.99
PTPRE-202ENST00000306042 WSB2Q9NYS7 404 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 SPIN1Q9Y657 262 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-202ENST00000306042 KNTC1P50748 2209 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 A0A0A6YYC8 382 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-202ENST00000306042 PRSS51A0A1B0GVH4 220 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 I3L1I5 382 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-202ENST00000306042 CLIC1O00299 241 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 IL3P08700 152 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 G6PDP11413 515 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 AHCYP23526 432 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 PLCXD2Q0VAA5 305 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 LRRC25Q8N386 305 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-202ENST00000306042 OR5K2Q8NHB8 316 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 TCTN2Q96GX1 697 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 ZFRQ96KR1 1074 aaKnown RBP8.88□□□□□ -0.99
PTPRE-202ENST00000306042 ALG2Q9H553 416 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 MYOCOSA0A1B0GUC4 107 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 EPOPA6NHQ4 379 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 BRINP1O60477 761 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 GPLD1P80108 840 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 RALGDSQ12967 914 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 ANGPT1Q15389 498 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 TMEM198Q66K66 360 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 RBM44Q6ZP01 1051 aaKnown RBP8.88□□□□□ -0.99
PTPRE-202ENST00000306042 JAZF1Q86VZ6 243 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-202ENST00000306042 ARL10Q8N8L6 244 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 EZH1Q92800 747 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-202ENST00000306042 TTC3P53804 2025 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 GPR37L1O60883 481 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 FAM20BO75063 409 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 SCELO95171 688 aa8.88□□□□□ -0.99
PTPRE-202ENST00000306042 C1orf105O95561 183 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms