RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 AKR7A2O43488 359 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ACADMP11310 421 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 MC4RP32245 332 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 SOX9P48436 509 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 GALNT1Q10472 559 aaPredicted RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 AFMIDQ63HM1 303 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 TYW3Q6IPR3 259 aaKnown RBP10.51□□□□□ -0.73
LSM3-201ENST00000306024 ERICH5Q6P6B1 374 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 KIF18BQ86Y91 864 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 PNPLA1Q8N8W4 532 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ZNF675Q8TD23 568 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 ULK4Q96C45 1275 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 YIPF6Q96EC8 236 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 TM9SF2Q99805 663 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 RNF167Q9H6Y7 350 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 SMURF1Q9HCE7 757 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 OSGIN1Q9UJX0 560 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 BAIAP2Q9UQB8 552 aa10.51□□□□□ -0.73
LSM3-201ENST00000306024 OR51F1A6NGY5 319 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 RPP40O75818 363 aaKnown RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 SCELO95171 688 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 RYKP34925 604 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 LIPAP38571 399 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 LCP2Q13094 533 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 TSTQ16762 297 aaKnown RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 FAM46CQ5VWP2 391 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 KDELC1Q6UW63 502 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 KIAA1324Q6UXG2 1013 aaKnown RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 VANGL1Q8TAA9 524 aaPredicted RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 ESAMQ96AP7 390 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 MBOAT4Q96T53 435 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 P2RY13Q9BPV8 354 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 RHNO1Q9BSD3 238 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 SPATA9Q9BWV2 254 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 GSTO2Q9H4Y5 243 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 FKBPLQ9UIM3 349 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 A0A096LPI6 279 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 CAPN5O15484 640 aaPredicted RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 HRH2P25021 359 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 C21orf33P30042 268 aaPredicted RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 TNFSF8P32971 234 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 GJA4P35212 333 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 BLVRAP53004 296 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 UGT2B15P54855 530 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 FOXA1P55317 472 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 EMX2Q04743 252 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 UNC50Q53HI1 259 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 AFTPHQ6ULP2 937 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 VWA5B2Q8N398 1253 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 CHST14Q8NCH0 376 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 OR56A4Q8NGH8 313 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 WDR36Q8NI36 951 aaKnown RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 ZNF431Q8TF32 576 aaPredicted RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 PTERQ96BW5 349 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 RACGAP1Q9H0H5 632 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 TMEM245Q9H330 911 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 RNF121Q9H920 327 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 ZNF304Q9HCX3 659 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 ZNF490Q9ULM2 529 aaPredicted RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 MAPRE3Q9UPY8 281 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 MRPS7Q9Y2R9 242 aaKnown RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 TCRBV5S2A0A599 114 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 TP53P04637 393 aaPredicted RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 FHP07954 510 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 ELFN1P0C7U0 828 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 GGT5P36269 586 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 MLLT3P42568 568 aaPredicted RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 EIF4HQ15056 248 aaKnown RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 POU4F3Q15319 338 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 SNAPC1Q16533 368 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 YIF1BQ5BJH7 314 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 DGKKQ5KSL6 1271 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 PIM3Q86V86 326 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 COMMD7Q86VX2 200 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 STK40Q8N2I9 435 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 TEX26Q8N6G2 289 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 SLC37A3Q8NCC5 494 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 MCMBPQ9BTE3 642 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 HDHD5Q9BXW7 423 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 IL1RAPQ9NPH3 570 aa10.5□□□□□ -0.73
LSM3-201ENST00000306024 ZMAT5Q9UDW3 170 aaKnown RBP10.5□□□□□ -0.73
LSM3-201ENST00000306024 SMLR1H3BR10 107 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 NRG2O14511 850 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 ORC5O43913 435 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 LEFTY1O75610 366 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 AP2A2O94973 939 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 MATN4O95460 622 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 PGRP06401 933 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 CHRM5P08912 532 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 MASP1P48740 699 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 SRP54P61011 504 aaKnown RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 RPL38P63173 70 aaKnown RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 SETMARQ53H47 684 aaPredicted RBP10.49□□□□□ -0.73
LSM3-201ENST00000306024 BHLHB9Q6PI77 547 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 NCEH1Q6PIU2 408 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 VITQ6UXI7 678 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 HDDC2Q7Z4H3 204 aa10.49□□□□□ -0.73
LSM3-201ENST00000306024 FAM86B1Q8N7N1 296 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms