RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 LIPJQ5W064 366 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 TPRG1Q6ZUI0 275 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 NKD1Q969G9 470 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 LMLNQ96KR4 655 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 RIPOR3Q96MK2 946 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 OR51I1Q9H343 314 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 TMEM45AQ9NWC5 275 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 ERVK13-1Q9NX77 482 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 STUB1Q9UNE7 303 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 ZCWPW2A0A1B0GU75 182 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 KRT33AO76009 404 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 GCAP28676 217 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 GMPRP36959 345 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 SH3BP2P78314 561 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 GINS1Q14691 196 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 ANKRD26P1Q6NSI1 321 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 BRAT1Q6PJG6 821 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 PRSS55Q6UWB4 352 aaPredicted RBP12.42□□□□□ -0.42
COL3A1-201ENST00000304636 IGFN1Q86VF2 1251 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 OR56A1Q8NGH5 318 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 NEIL3Q8TAT5 605 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 ARMC5Q96C12 935 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 CD180Q99467 661 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 TAS2R10Q9NYW0 307 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 UTS2RQ9UKP6 389 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 C12orf71A8MTZ7 269 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 UQCRC2P22695 453 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 NRIP1P48552 1158 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 FADDQ13158 208 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 SEC23BQ15437 767 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 SPHARQ15513 63 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 TRAM1Q15629 374 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 TICAM1Q8IUC6 712 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 ATP6V1C2Q8NEY4 427 aa12.42□□□□□ -0.42
COL3A1-201ENST00000304636 GNB5O14775 395 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 RP2O75695 350 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 EPHX1P07099 455 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 CKMT1AP12532 417 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ZNF30P17039 623 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 BDKRB1P46663 353 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 OR8J1Q8NGP2 316 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 NUS1Q96E22 293 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 TRMT61BQ9BVS5 477 aaKnown RBP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ENPP5Q9UJA9 477 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 MYH6P13533 1939 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 HTR3EA5X5Y0 456 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 SOBPA7XYQ1 873 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 CCL16O15467 120 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 JUNP05412 331 aaKnown RBP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 BMP8BP34820 402 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 KCNQ1P51787 676 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 PPIGQ13427 754 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ABRAXAS2Q15018 415 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 TRAM2Q15035 370 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 TMCO2Q7Z6W1 182 aaPredicted RBP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 UMODL1-AS1Q8N2C9 162 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 MSANTD3Q96H12 275 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 BEX2Q9BXY8 128 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ADAP2Q9NPF8 381 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 NENFQ9UMX5 172 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 B3GNT3Q9Y2A9 372 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 H7C2Y5 167 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 MAFKO60675 156 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 AOC2O75106 756 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 MTX2O75431 263 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 UPK1BO75841 260 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 PDYNP01213 254 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 CRISP1P54107 249 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 CTU1Q7Z7A3 348 aaKnown RBP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 OR2L3Q8NG85 312 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 GAL3ST1Q99999 423 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 TREM1Q9NP99 234 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 GKN1Q9NS71 199 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 MGAT4AQ9UM21 535 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 CLCA3PQ9Y6N3 262 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 LRRC37A3O60309 1634 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 NALCNQ8IZF0 1738 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ELOA3DA6NLF2 546 aaPredicted RBP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 HOXD8P13378 290 aaPredicted RBP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 CEBPGP53567 150 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 OR12D2P58182 307 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ELOA3BQ3SY89 546 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 HSDL2Q6YN16 418 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 TMEM17Q86X19 198 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 SAMD12Q8N8I0 201 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 MFSD2AQ8NA29 543 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ELOA3Q8NG57 546 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 SLC5A11Q8WWX8 675 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 MAELQ96JY0 434 aaKnown RBP12.41□□□□□ -0.42
COL3A1-201ENST00000304636 SCGB3A2Q96PL1 93 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 PSKH2Q96QS6 385 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 ACTR6Q9GZN1 396 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 RNF208Q9H0X6 261 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 EXO5Q9H790 373 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 PCDHB11Q9Y5F2 797 aa12.41□□□□□ -0.42
COL3A1-201ENST00000304636 A0A0G2JN53 185 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms