RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 LRRC32Q14392 662 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 AMIGO1Q86WK6 493 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 DHFR2Q86XF0 187 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 TMEFF1Q8IYR6 380 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 NAGSQ8N159 534 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 SYNPOQ8N3V7 929 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 CIDECQ96AQ7 238 aaPredicted RBP23.04■■□□□ 1.28
SHISA5-201ENST00000296444 MIR1-1HGQ9H1L0 117 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 KIR3DX1Q9H7L2 352 aa23.04■■□□□ 1.28
SHISA5-201ENST00000296444 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.04■■□□□ 1.28
SHISA5-201ENST00000296444 PRSS51A0A1B0GVH4 220 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 ISM1B1AKI9 464 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 CHRM5P08912 532 aaPredicted RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 HSD3B1P14060 373 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 HSD3B2P26439 372 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 TAS2R50P59544 299 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 REEP5Q00765 189 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 KLHL35Q6PF15 583 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 PNPT1Q8TCS8 783 aaKnown RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 KCTD14Q9BQ13 255 aaPredicted RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 THUMPD3Q9BV44 507 aaKnown RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 TMEM121BQ9BXQ6 578 aaPredicted RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 SEMA6AQ9H2E6 1030 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 RPF2Q9H7B2 306 aaKnown RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 PLGRKTQ9HBL7 147 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 PCOLCE2Q9UKZ9 415 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 H3BSA7 217 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 CPSF4O95639 269 aaKnown RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 MT-ND1P03886 318 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 PRPS1L1P21108 318 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 ALDH3B2P48448 385 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 CD97P48960 835 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 CYP4F3Q08477 520 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 C16orf72Q14CZ0 275 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 GPR180Q86V85 440 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 METTL4Q8N3J2 472 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 GPBAR1Q8TDU6 330 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 AIF1LQ9BQI0 150 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 MRPS30Q9NP92 439 aaKnown RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 GPR27Q9NS67 375 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 TRNAU1APQ9NX07 287 aaKnown RBP23.03■■□□□ 1.28
SHISA5-201ENST00000296444 SH3BP4Q9P0V3 963 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 PCDHGB4Q9UN71 923 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 PCDHGB5Q9Y5G0 923 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 DGKBQ9Y6T7 804 aa23.03■■□□□ 1.28
SHISA5-201ENST00000296444 ANKDD1BA6NHY2 528 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 KIR3DL1P43629 444 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 PLA2G16P53816 162 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 RUNDC3AQ59EK9 446 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 SLC9B2Q86UD5 537 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 DTWD1Q8N5C7 304 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 PJA1Q8NG27 643 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 FLVCR1-AS1Q8TAF5 88 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 CREB3L4Q8TEY5 395 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 C16orf78Q8WTQ4 265 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 CXorf40BQ96DE9 158 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 MS4A8Q9BY19 250 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 TMEM45AQ9NWC5 275 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 PCDHB11Q9Y5F2 797 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 NCOR1O75376 2440 aa23.02■■□□□ 1.28
SHISA5-201ENST00000296444 EML5Q05BV3 1969 aa23.02■■□□□ 1.27
SHISA5-201ENST00000296444 TCRBV3S1A0A5B6 114 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 KCNJ13O60928 360 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 TNFP01375 233 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 POLR2CP19387 275 aaPredicted RBP23.01■■□□□ 1.27
SHISA5-201ENST00000296444 MAPK1P28482 360 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 HSD17B2P37059 387 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 PIK3CBP42338 1070 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 FOXM1Q08050 763 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 DEPDC1Q5TB30 811 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 GALNT18Q6P9A2 607 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 KRT78Q8N1N4 520 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SMYD1Q8NB12 490 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 TSPAN14Q8NG11 270 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 OR10G6Q8NH81 332 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 REPS1Q96D71 796 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 RHBGQ9H310 441 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 PELI2Q9HAT8 420 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SPTBP11277 2137 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SH3PXD2BA1X283 911 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SCAMP2O15127 329 aaKnown RBP23.01■■□□□ 1.27
SHISA5-201ENST00000296444 TXNL4AP83876 142 aaKnown RBP23.01■■□□□ 1.27
SHISA5-201ENST00000296444 RHDQ02161 417 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 HYAL2Q12891 473 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 CBX3Q13185 183 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SPIN4Q56A73 249 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 C6orf52Q5T4I8 152 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 PRMT9Q6P2P2 845 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 Q6ZNX1 250 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 TAF8Q7Z7C8 310 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SLC37A2Q8TED4 501 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 LRTOMTQ8WZ04 291 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 KLHDC7BQ96G42 594 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 FAF1Q9UNN5 650 aaPredicted RBP23.01■■□□□ 1.27
SHISA5-201ENST00000296444 MRPS17Q9Y2R5 130 aaKnown RBP23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SNX11Q9Y5W9 270 aa23.01■■□□□ 1.27
SHISA5-201ENST00000296444 SH3BP5O60239 455 aa23■■□□□ 1.27
SHISA5-201ENST00000296444 PRKRAO75569 313 aaKnown RBP23■■□□□ 1.27
SHISA5-201ENST00000296444 BSGP35613 385 aa23■■□□□ 1.27
SHISA5-201ENST00000296444 LSSP48449 732 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms