RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 HTRA3P83110 453 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 FAM214AQ32MH5 1076 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF572Q7Z3I7 529 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 TSGA13Q96PP4 275 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 DUX1O43812 170 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ASGR2P07307 311 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 VEGFBP49765 207 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 ELOAQ14241 798 aaKnown RBP16.7■□□□□ 0.26
SHANK1-201ENST00000293441 TYSND1Q2T9J0 566 aa16.7■□□□□ 0.26
SHANK1-201ENST00000293441 TCHHQ07283 1943 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF865P0CJ78 1059 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-201ENST00000293441 RTP2Q5QGT7 225 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 CCSAPQ6IQ19 270 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-201ENST00000293441 EPGNQ6UW88 154 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 CCDC36Q8IYA8 594 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 KCNJ9Q92806 393 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 A6NCN8 305 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 CKMT2P17540 419 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 GABRA3P34903 492 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 NUDT6P53370 316 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 PCLAFQ15004 111 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 FEZF1A0PJY2 475 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 CDC40O60508 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHANK1-201ENST00000293441 PRH1P02810 166 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 GSK3BP49841 420 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 PITX1P78337 314 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-201ENST00000293441 SYT16Q17RD7 645 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 KCTD7Q96MP8 289 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 OSBPL7Q9BZF2 842 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 REEP4Q9H6H4 257 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 TIMMDC1Q9NPL8 285 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
SHANK1-201ENST00000293441 NR2C1P13056 603 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 PFKLP17858 780 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 RUNX3Q13761 415 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 SPIN3Q5JUX0 258 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF782Q6ZMW2 699 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-201ENST00000293441 KBTBD6Q86V97 674 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 PDE7BQ9NP56 450 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 VILLO15195 856 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 PSKH1P11801 424 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 IFI30P13284 250 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 HK1P19367 917 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 MLLT10P55197 1068 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 EMX2Q04743 252 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 FIP1L1Q6UN15 594 aaKnown RBP16.69■□□□□ 0.26
SHANK1-201ENST00000293441 IGDCC3Q8IVU1 814 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 ZNF611Q8N823 705 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 OR2L8Q8NGY9 312 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 STON2Q8WXE9 905 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 HERC2P3Q9BVR0 1158 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 TTTY10Q9BZA0 68 aa16.69■□□□□ 0.26
SHANK1-201ENST00000293441 C11orf98E9PRG8 122 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 VEGFDO43915 354 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 S100A9P06702 114 aaKnown RBP16.68■□□□□ 0.26
SHANK1-201ENST00000293441 CHRM1P11229 460 aaPredicted RBP16.68■□□□□ 0.26
SHANK1-201ENST00000293441 GLDCP23378 1020 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 CDKL1Q00532 357 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PON3Q15166 354 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 APCDD1Q8J025 514 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 SCO2O43819 266 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 LIN52Q52LA3 116 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 MAMDC4Q6UXC1 1216 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PAMR1Q6UXH9 720 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 MRGPRX2Q96LB1 330 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 TSSK6Q9BXA6 273 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 ZBTB26Q9HCK0 441 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PCDHB14Q9Y5E9 798 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 C2orf92A0A1B0GVN3 265 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 MLLT1Q03111 559 aaPredicted RBP16.68■□□□□ 0.26
SHANK1-201ENST00000293441 SLAMF1Q13291 335 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 SLC35F1Q5T1Q4 408 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 TMEM225Q6GV28 225 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 FRMD7Q6ZUT3 714 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 SLC2A13Q96QE2 648 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 MND1Q9BWT6 205 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 C14orf105Q9NVL8 296 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 LAMP5Q9UJQ1 280 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PLEKHA6Q9Y2H5 1048 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 OARD1Q9Y530 152 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 LOC100130705A0A1B0GUX0 176 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PRSS51A0A1B0GVH4 220 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PDYNP01213 254 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 RING1Q06587 406 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 TPRG1LQ5T0D9 272 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 NIPAL1Q6NVV3 410 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 ZDHHC14Q8IZN3 488 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PLD6Q8N2A8 252 aaKnown RBP16.68■□□□□ 0.26
SHANK1-201ENST00000293441 LINC00471Q8N535 108 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 HSPBAP1Q96EW2 488 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 TRIM64A6NGJ6 449 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 TLX2O43763 284 aaPredicted RBP16.68■□□□□ 0.26
SHANK1-201ENST00000293441 SCGB2B2Q4G0G5 96 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 LIPJQ5W064 366 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 NXPE2Q96DL1 559 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 CYTH4Q9UIA0 394 aa16.68■□□□□ 0.26
SHANK1-201ENST00000293441 PLCL2Q9UPR0 1127 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms