RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ANKFN1Q8N957 763 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 FAM129BQ96TA1 746 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 C16orf70Q9BSU1 422 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 AASSQ9UDR5 926 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 MAFFQ9ULX9 164 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 CYP8B1Q9UNU6 501 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 OR6C70A6NIJ9 312 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ARRB1P49407 418 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 OR56A1Q8NGH5 318 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 OR10T2Q8NGX3 314 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 C9orf43Q8TAL5 461 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 EPYCQ99645 322 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 SLC22A4Q9H015 551 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TRPV4Q9HBA0 871 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ZNF451Q9Y4E5 1061 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 PCDHB14Q9Y5E9 798 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TEX46H3BTG2 121 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 PLOD2O00469 737 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 KLF8O95600 359 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 RLN2P04090 185 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 FAM163BP0C2L3 166 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ZNF12P17014 697 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 GLDCP23378 1020 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 NANOGP8Q6NSW7 305 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TP53INP2Q8IXH6 220 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 KLHDC7BQ96G42 594 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 MCHR1Q99705 422 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 MND1Q9BWT6 205 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 KCNH6Q9H252 994 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 LDAHQ9H6V9 325 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 NANOGQ9H9S0 305 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TRIM36Q9NQ86 728 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 SLCO3A1Q9UIG8 710 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 FARSAQ9Y285 508 aaKnown RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 PLD2O14939 933 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 HCKP08631 526 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 OR12D1P0DN82 309 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ELK4P28324 431 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 APLP1P51693 650 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 PIGFQ07326 219 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 WDTC1Q8N5D0 677 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 SEC14L1Q92503 715 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 MRGPRX2Q96LB1 330 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ZNF778Q96MU6 729 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 SEZ6LQ9BYH1 1024 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 GPR89AB7ZAQ6 455 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 OR7A10O76100 309 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 FHP07954 510 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ZNF806P0C7X5 589 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 GPR89BP0CG08 455 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 GP1BBP13224 206 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 SOX2P48431 317 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ZNF630Q2M218 657 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 NOXRED1Q6NXP6 359 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TIFABQ6ZNK6 161 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TREML1Q86YW5 311 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 TMEM126BQ8IUX1 230 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 ERMAPQ96PL5 475 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 WDR77Q9BQA1 342 aaPredicted RBP11.07□□□□□ -0.64
USP53-201ENST00000274030 PARPBPQ9NWS1 579 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 GRHPRQ9UBQ7 328 aa11.07□□□□□ -0.64
USP53-201ENST00000274030 MED1Q15648 1581 aaPredicted RBP11.06□□□□□ -0.64
USP53-201ENST00000274030 H0YGN5 161 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 DFNA5O60443 496 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 BCAS2O75934 225 aaPredicted RBP11.06□□□□□ -0.64
USP53-201ENST00000274030 KAT7O95251 611 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 PDYNP01213 254 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 ALDOAP04075 364 aaKnown RBP11.06□□□□□ -0.64
USP53-201ENST00000274030 CDHR3Q6ZTQ4 885 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 SLC9B2Q86UD5 537 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 NATD1Q8N6N6 113 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 OR51G2Q8NGK0 314 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 LMO3Q8TAP4 145 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 APOC1P02654 83 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 ASGR2P07307 311 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 GRK5P34947 590 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 SLC18A1P54219 525 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 UGT8Q16880 541 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.06□□□□□ -0.64
USP53-201ENST00000274030 REEP3Q6NUK4 255 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 DTX3Q8N9I9 347 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 RIT1Q92963 219 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 MEAF6Q9HAF1 191 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 SPHK2Q9NRA0 654 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 VNN3Q9NY84 501 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 MARCH4Q9P2E8 410 aaPredicted RBP11.06□□□□□ -0.64
USP53-201ENST00000274030 SERTAD3Q9UJW9 196 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 STYXL1Q9Y6J8 313 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 TCHHQ07283 1943 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 C13orf42A0A1B0GVH6 325 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 ZNF670-ZNF695F2Z2N8 137 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 MUSKO15146 869 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 PROM1O43490 865 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 AHSA1O95433 338 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 MAGEA11P43364 429 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 ACADVLP49748 655 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 MPP2Q14168 576 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 ITPRIPL2Q3MIP1 535 aa11.06□□□□□ -0.64
USP53-201ENST00000274030 PSAPL1Q6NUJ1 521 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms