RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ZNF888P0CJ79 500 aaPredicted RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 SMIM10L1P0DMW3 83 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 AGAP20933 346 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 MAOAP21397 527 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 NME2P22392 152 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 HRH2P25021 359 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 PTGER1P34995 402 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 SCTRP47872 440 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 AGTR2P50052 363 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 HNRNPFP52597 415 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 ALDH6A1Q02252 535 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 SP140Q13342 867 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 NSDHLQ15738 373 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 EXT1Q16394 746 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 PPP1R3AQ16821 1122 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 DEFB134Q4QY38 66 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 CCDC137Q6PK04 289 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 SBSNQ6UWP8 590 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 GDF7Q7Z4P5 450 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 C17orf64Q86WR6 236 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 DOLPP1Q86YN1 238 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 ARMC10Q8N2F6 343 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 RPRMLQ8N4K4 120 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
TPM3-201ENST00000271850 CAMKVQ8NCB2 501 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 APCDD1LQ8NCL9 501 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 TMEM52Q8NDY8 209 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 SUN3Q8TAQ9 357 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 NT5CQ8TCD5 201 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 UTP15Q8TED0 518 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 AGAP11Q8TF27 550 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 MAIP1Q8WWC4 291 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 NEIL2Q969S2 332 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 MAGOHBQ96A72 148 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 ALKBH8Q96BT7 664 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 SMIM10Q96HG1 83 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 PWWP2AQ96N64 755 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 UTP23Q9BRU9 249 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 XAB2Q9HCS7 855 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 NECTIN3Q9NQS3 549 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 SAMD15Q9P1V8 674 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 C19orf25Q9UFG5 118 aaPredicted RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 TEKT2Q9UIF3 430 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 TRMT6Q9UJA5 497 aaKnown RBP8.38□□□□□ -1.07
TPM3-201ENST00000271850 COMMD10Q9Y6G5 202 aa8.38□□□□□ -1.07
TPM3-201ENST00000271850 TCRBV16S1A1N1A0A5B0 115 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 MAGEB16A2A368 324 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 PINLYPA6NC86 204 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 SAGE2PA6NJ88 616 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TMEM200CA6NKL6 621 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TP73O15350 636 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 SLC16A5O15375 505 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TTI1O43156 1089 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 B4GALT2O60909 372 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 SLC25A12O75746 678 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 CLDN14O95500 239 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 C8GP07360 202 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 COX6B1P14854 86 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 ALOX12P18054 663 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 IVDP26440 423 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 EEF1DP29692 281 aaKnown RBP8.37□□□□□ -1.07
TPM3-201ENST00000271850 PPP2R1BP30154 601 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TRHRP34981 398 aaPredicted RBP8.37□□□□□ -1.07
TPM3-201ENST00000271850 RFC3P40938 356 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 GPR143P51810 404 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 OR4D2P58180 307 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 MLF1P58340 268 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 AP2B1P63010 937 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 SARNPP82979 210 aaKnown RBP8.37□□□□□ -1.07
TPM3-201ENST00000271850 REEP5Q00765 189 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 C18orf21Q32NC0 220 aaPredicted RBP8.37□□□□□ -1.07
TPM3-201ENST00000271850 SLC25A25Q6KCM7 469 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TRMT10BQ6PF06 316 aaKnown RBP8.37□□□□□ -1.07
TPM3-201ENST00000271850 XKRXQ6PP77 449 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 QSOX2Q6ZRP7 698 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 STRA8Q7Z7C7 330 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 RPS19BP1Q86WX3 136 aaKnown RBP8.37□□□□□ -1.07
TPM3-201ENST00000271850 LMNTD2Q8IXW0 634 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 LGI4Q8N135 537 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TRIM58Q8NG06 486 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 MCOLN3Q8TDD5 553 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 CREB3L4Q8TEY5 395 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TBC1D20Q96BZ9 403 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 FBXL8Q96CD0 374 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 MTFMTQ96DP5 389 aaKnown RBP8.37□□□□□ -1.07
TPM3-201ENST00000271850 SNF8Q96H20 258 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 TSNARE1Q96NA8 513 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 LPAR4Q99677 370 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 FAM167BQ9BTA0 163 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 ENKD1Q9H0I2 346 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 CCDC68Q9H2F9 335 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 CHST11Q9NPF2 352 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 HOMER3Q9NSC5 361 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 LRFN1Q9P244 771 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 MAD1L1Q9Y6D9 718 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 MED13LQ71F56 2210 aa8.37□□□□□ -1.07
TPM3-201ENST00000271850 ZNF407Q9C0G0 2248 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 TRBC2A0A5B9 178 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 NDC80O14777 642 aa8.36□□□□□ -1.07
TPM3-201ENST00000271850 OR1F1O43749 312 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms