RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SERPIND1P05546 499 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 SERPINA6P08185 405 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 ZNF888P0CJ79 500 aaPredicted RBP9.14□□□□□ -0.95
VPS41-201ENST00000265745 SMIM10L1P0DMW3 83 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 MST1P26927 711 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 CD96P40200 585 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 GDF5P43026 501 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 HNMTP50135 292 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 KCNK10P57789 538 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 SKP1P63208 163 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 OLR1P78380 273 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 REEP5Q00765 189 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 HYAL2Q12891 473 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 ZNF460Q14592 562 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 USP10Q14694 798 aaKnown RBP9.14□□□□□ -0.95
VPS41-201ENST00000265745 FCRLBQ6BAA4 426 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 ZNF787Q6DD87 383 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 PAPD4Q6PIY7 484 aaKnown RBP9.14□□□□□ -0.95
VPS41-201ENST00000265745 ABHD13Q7L211 337 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 CEP97Q8IW35 865 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 ZBED8Q8IZ13 594 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 BEST3Q8N1M1 668 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 BBOF1Q8ND07 529 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 TRPV3Q8NET8 790 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 SUN3Q8TAQ9 357 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 CREB3L4Q8TEY5 395 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 RELTQ969Z4 430 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 RHBDF1Q96CC6 855 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 SMIM10Q96HG1 83 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 VPS39Q96JC1 886 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 PDLIM2Q96JY6 352 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 LPAR4Q99677 370 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 NPAS2Q99743 824 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 AIF1LQ9BQI0 150 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 RHOJQ9H4E5 214 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 PELI2Q9HAT8 420 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 KCNK13Q9HB14 408 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 SMYD2Q9NRG4 433 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 NSMCE4AQ9NXX6 385 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 PYCARDQ9ULZ3 195 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 ZNF232Q9UNY5 417 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 DYRK1BQ9Y463 629 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 OARD1Q9Y530 152 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 TEX15Q9BXT5 2789 aa9.14□□□□□ -0.95
VPS41-201ENST00000265745 A0A1B0GUH1 482 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 URADA6NGE7 173 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 CXorf49A8MYA2 514 aaPredicted RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 NDC80O14777 642 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 MAN1A2O60476 641 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 WISP2O76076 250 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 WISP3O95389 354 aaPredicted RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 JAK1P23458 1154 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 DCTP40126 519 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 HNF4AP41235 474 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 PER3P56645 1201 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 OR4D2P58180 307 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 SLC26A5P58743 744 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 RAB8AP61006 207 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 BTG2P78543 158 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 MRPS25P82663 173 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 POU4F1Q01851 419 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 SRSF11Q05519 484 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 ILF2Q12905 390 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 TUBA3CQ13748 450 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 RBBP5Q15291 538 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 TSNQ15631 228 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 ZRSR2Q15696 482 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 MEP1AQ16819 746 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 C18orf21Q32NC0 220 aaPredicted RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 ZNF766Q5HY98 468 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 SPINK14Q6IE38 97 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 TUBA3EQ6PEY2 450 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 GFRALQ6UXV0 394 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 SLCO4C1Q6ZQN7 724 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 CYS1Q717R9 158 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 TMPRSS11BQ86T26 416 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 ADAMTSL2Q86TH1 951 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 CRLF3Q8IUI8 442 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 KLHDC8AQ8IYD2 350 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 ALDH16A1Q8IZ83 802 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 SLC5A8Q8N695 610 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 MDS2Q8NDY4 140 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 ELP5Q8TE02 316 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 PYROXD1Q8WU10 500 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 PTCHD1Q96NR3 888 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 EGFL8Q99944 293 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 UTP23Q9BRU9 249 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 DERL2Q9GZP9 239 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 AICDAQ9GZX7 198 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 KLHL31Q9H511 634 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 POPDC3Q9HBV1 291 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 GPAMQ9HCL2 828 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 CTNNAL1Q9UBT7 734 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 MTO1Q9Y2Z2 717 aaKnown RBP9.13□□□□□ -0.95
VPS41-201ENST00000265745 PCDHGB6Q9Y5F9 930 aa9.13□□□□□ -0.95
VPS41-201ENST00000265745 IGKV3D-11A0A0A0MRZ8 115 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 C4orf51C9J302 202 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 FAM227AF5H4B4 570 aa9.12□□□□□ -0.95
VPS41-201ENST00000265745 ZG16O60844 167 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms