RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PCDH7O60245 1069 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 CCDC22O60826 627 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 KRT34O76011 436 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 UBOX5O94941 541 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 ANXA4P09525 319 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 TPP2P29144 1249 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 IL12AP29459 219 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 SERPINB1P30740 379 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 PDX1P52945 283 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 BTN3A2P78410 334 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 RELAQ04206 551 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 RGS1Q08116 209 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 PWP1Q13610 501 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 NAA25Q14CX7 972 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 RPS6KA2Q15349 733 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 SPRED3Q2MJR0 410 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 ADPRMQ3LIE5 342 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 AGKQ53H12 422 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 ZC3H12BQ5HYM0 836 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 C10orf62Q5T681 223 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF793Q6ZN11 406 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 GK5Q6ZS86 529 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 SLITRK4Q8IW52 837 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 KIAA2013Q8IYS2 634 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 MMP21Q8N119 569 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 D2HGDHQ8N465 521 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 CPSF7Q8N684 471 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 OR8K5Q8NH50 307 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 OR1L3Q8NH93 324 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 NT5CQ8TCD5 201 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 UTP15Q8TED0 518 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 UCN3Q969E3 161 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 THAP11Q96EK4 314 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 FCRL1Q96LA6 429 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF768Q9H5H4 540 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 PRDM7Q9NQW5 492 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 NMRK1Q9NWW6 199 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 IRAK4Q9NWZ3 460 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 TOR4AQ9NXH8 423 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 NOP53Q9NZM5 478 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 CCDC167Q9P0B6 97 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 PDP2Q9P2J9 529 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 PPT2Q9UMR5 302 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 PLCL2Q9UPR0 1127 aa9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 EIF3LQ9Y262 564 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-201ENST00000263694 CEP250Q9BV73 2442 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF860A6NHJ4 632 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 CAPN14A8MX76 684 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 PSMD12O00232 456 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 EBAG9O00559 213 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 ANKRD28O15084 1053 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 TMPRSS11DO60235 418 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 CBX6O95503 412 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 GP1BAP07359 652 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC35G6P0C7Q6 338 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SMIM10L1P0DMW3 83 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 IDO1P14902 403 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 IL1RNP18510 177 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 CERS1P27544 350 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 PIK3R1P27986 724 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 TIA1P31483 386 aaKnown RBP eCLIP9.25□□□□□ -0.937e-14■■■■□ 21.6
SNRNP40-201ENST00000263694 SSR2P43308 183 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 ZFP36L2P47974 494 aaKnown RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 MC1RQ01726 317 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SQLEQ14534 574 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 C16orf72Q14CZ0 275 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 TRIP6Q15654 476 aaKnown RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 DEFB134Q4QY38 66 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SPIN4Q56A73 249 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 CCNYL2Q5T2Q4 361 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 OR4C11Q6IEV9 310 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 ABHD17CQ6PCB6 329 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SLCO6A1Q86UG4 719 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 FUNDC1Q8IVP5 155 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 MIER2Q8N344 545 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 METTL27Q8N6F8 245 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF655Q8N720 491 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 CAMKVQ8NCB2 501 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 OR2L5Q8NG80 312 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 PROKR1Q8TCW9 393 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 N4BP2L2Q92802 583 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SMIM10Q96HG1 83 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 CDC6Q99741 560 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 BRINP2Q9C0B6 783 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SDR39U1Q9NRG7 319 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 OCIAD1Q9NX40 245 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 CAPN7Q9Y6W3 813 aa9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 NUP214P35658 2090 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-201ENST00000263694 SPAARA0A1B0GVQ0 90 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 WASHC1A8K0Z3 465 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 H3BMH7 237 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 MAP3K7O43318 606 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SRPX2O60687 465 aaPredicted RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 PRKRAO75569 313 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 MYO1DO94832 1006 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 SEMA3DO95025 777 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 T-ENOLP0DO92 83 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 ATP5A1P25705 553 aaKnown RBP9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 GSTM2P28161 218 aa9.24□□□□□ -0.93
SNRNP40-201ENST00000263694 CPA2P48052 419 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms